Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04336 ATGTTTTTGAAGTACCCTTATAATGGTTTTGGTTTGACTAGAATAGTGTCACAGCTTGCACCACAGTTTTATACCAAAGAAGACTTGAATCAAATAAAGGAACTCCACAAAAAGTTTTGCCAAGAATCATCTTCACATAATAACACAATGGAAGAGACAAAGCCAATGAAAAGGTATCACGAAACTAAAGAAGACAAGTTTGAAGGAGGAAAAAGAATCAAACTAATTATGAAGAAAAAGTCAACATCACCACCACCACCGGCACCAGATTTGCCTGATCAATTCATGAATCGAATAAGAGAGTTGGATGGTAGTGATGTGAAGTATGTAATGTACAAGAAGTTGAGCAACACGGATGTCAACATAAACAACAATCGTCTCTCAATGCCAAGCAAACAAATAAGGTGTGATTTATTCACTGAAAGAGAGAAAGCAATATTGCGTTCAACGAATGAAGACAATCGACCTGTTGGTTTGGAAGTGGTTGTCTTGGACCCTTCTCTTAGAGAGTTTGATATAACCTTGAAGAAGTGGGACATGCAGAGTACAAGTGTTTACAATCTAGTTAAAAACTGGAAACTTATTTTATCACATAATAATTTACAAGTAAATCATGAATTCCACATTTGGTCTTTTAGGGTCAATCATAAACTATACTTTATATTGAGCAATAAGGATCCCTAG 684 0.3538 MFLKYPYNGFGLTRIVSQLAPQFYTKEDLNQIKELHKKFCQESSSHNNTMEETKPMKRYHETKEDKFEGGKRIKLIMKKKSTSPPPPAPDLPDQFMNRIRELDGSDVKYVMYKKLSNTDVNINNNRLSMPSKQIRCDLFTEREKAILRSTNEDNRPVGLEVVVLDPSLREFDITLKKWDMQSTSVYNLVKNWKLILSHNNLQVNHEFHIWSFRVNHKLYFILSNKDP. 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04336 227 Gene3D - 89 226 IPR015300 -
Seca12g04336 227 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 31 223 IPR005508 GO:0003677
Seca12g04336 227 SUPERFAMILY DNA-binding pseudobarrel domain 110 222 IPR015300 -
Seca12g04336 227 Pfam B3 domain-containing protein At2g31720-like 92 196 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04336 Seca-Chr12 117980377 117981060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04336 99 222 B3 DNA Binding Superfamily AT1G05930 23.810 6.53e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04336 - - psat:127101787 188.734