Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04334 ATGGAGACTTGGTTCGTCGTGCTGGTCTCTCTCTGCATAGGCTTCCTCATCAGAGCCATATTCTCCAATCCCTCATCCAACATAACCATCCCTCCTGGTCCTCCCCACATCCCCATCATCACAAGCATCACATGGCTCAGAAAATCAGCCTCTCAACTGGAACCCATTATCAATAGCCTCCACGCCAAACACGGTCCTATCATCACCCTCCGCATCGGCTCACGTCCCGCTATTTTCATCGCTGACCGTTCACTCGCCCATCAAGCACTCATCCAAAACGGTTCTCTGTTTTCTGATCGCCCTAAACCCCTTCCAACCAGCAATCTCCTCTCCTGTAACCAACACAGCATCAACACTGCCCACTACGGTGCCACGTGGCGCGCCTTCCGTCGTAACCTCGCAACCGAGATGCTTCACCCCTCGCGCGTGAAGTCCTTCTCCGAAACCCGCAAGTGGGTGCTCGACACCCTCCTCACGCGCTTGAAATCAAATTCGGAATCTCAATCGACTCATTCTGTTAGAGTCATCGACCACCTTCGTTACGCCATGTTCTGTTTGCTCGTTTTCATGTCTTTCGGGGAAAGAGTCAGCGACGAGATAGTGAAAGACGTCGAGCGTGTCCAGAGGAACGTCCTTTTGGGATTCAGGAGATTCAACATCCTGAATTTCTGGCCCAAACTCACTCGAATTTTGTTCCGGAATCGCTGGGAGGAGTTGTTGAGGCTTGTGAAGGAGCAAGAGGATGTGCTGGTTCCGTTGATAAGAGAAAGGAGAAGGAATCGAGTCAAGGAAGAAGGTAGATTGAATAAAGACTCTGTTGTGTGCTATGTGGATACTCTGTTGGAATTGGAGTTGCCTGAGGAGAAACGCAAGCTGAACGAAAAGGAAGTGGTTAGTTTGTGTTCGGAGTTTCTGAACGCTGGCACGGACACAACTTCCACCGCGTTGGAATGGATCATGGCGAATTTGGTGAAGTACCCGCACGTGCAACAGAGGGTTGTGGAGGAGATTAGGGAGGTGGTGGGAGAAGAGAAGGAAGTGAAGGAGGAAGATTTGCAGAAGCTGCGTTATCTGAAGGCTGTCGTTTTGGAAGGTTTAAGACGTCACCCGCCAGGGCATTTTGTGTTGCCACATGCTGTGACTGAGGATGTCGTTTTGGATGGTTACTTAGTGCCTAAAAATGGGAGTGTGAATTTTATGGTGGCGGAGATGGGGTGGGACCCACAGGTGTGGGAGGATCCCATGGAGTTCAAGCCGGAGAGGTTCTTGAAAGATGGGGAGAAGGAGGTTGAGGCGTTTGACATTACTGGGAGTAAAGAGATAAGGATGATGCCGTTTGGAGCAGGGAGGAGGATTTGTCCTGGCTATAATTTAGCTTTGCTCCATTTGGAATACTTTGTGGCCAATTTGGTTTGGAATTTTGATTGGAAGGTTCCAGAAGGAGGGGATGTTGATTTGTCTGAAATACAGGAATTTACTATGGTCATGAAAAATCCATTGCAGGTTCATCTTTCTCCTAGGATTTAG 1527 0.4931 METWFVVLVSLCIGFLIRAIFSNPSSNITIPPGPPHIPIITSITWLRKSASQLEPIINSLHAKHGPIITLRIGSRPAIFIADRSLAHQALIQNGSLFSDRPKPLPTSNLLSCNQHSINTAHYGATWRAFRRNLATEMLHPSRVKSFSETRKWVLDTLLTRLKSNSESQSTHSVRVIDHLRYAMFCLLVFMSFGERVSDEIVKDVERVQRNVLLGFRRFNILNFWPKLTRILFRNRWEELLRLVKEQEDVLVPLIRERRRNRVKEEGRLNKDSVVCYVDTLLELELPEEKRKLNEKEVVSLCSEFLNAGTDTTSTALEWIMANLVKYPHVQQRVVEEIREVVGEEKEVKEEDLQKLRYLKAVVLEGLRRHPPGHFVLPHAVTEDVVLDGYLVPKNGSVNFMVAEMGWDPQVWEDPMEFKPERFLKDGEKEVEAFDITGSKEIRMMPFGAGRRICPGYNLALLHLEYFVANLVWNFDWKVPEGGDVDLSEIQEFTMVMKNPLQVHLSPRI. 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04334 508 CDD CYP77_89 63 501 - -
Seca12g04334 508 Pfam Cytochrome P450 31 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04334 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Seca12g04334 508 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04334 508 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04334 508 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04334 508 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04334 508 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 500 - -
Seca12g04334 508 SUPERFAMILY Cytochrome P450 31 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04334 508 FunFam Cytochrome P450 family protein 24 508 - -
Seca12g04334 508 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04334 508 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04334 508 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04334 508 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04334 508 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04334 508 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04334 508 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04334 508 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g04334 508 Gene3D Cytochrome P450 25 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04334 Seca-Chr12 117963002 117964549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04334 1 507 Cytochrome P450 AT1G64940 57.447 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04334 K24184 - gmx:100795683 713.761