Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04305 ATGGGGAAGAACTTATTGATGAAGCGCTCTATCATCGAGGATGCTCACAAAATTGGGAATAAAACCTCCCTTAACCTAGTTCCCCTCCTTGTGGGGAACGTGGCATTGATTTTCACCAAAGGGGACTTGAGGGAGGTTAGTGAACGGATTGCCAAGTACAAGGTTAAGTAA 171 0.4503 MGKNLLMKRSIIEDAHKIGNKTSLNLVPLLVGNVALIFTKGDLREVSERIAKYKVK. 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04305 56 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 56 - -
Seca12g04305 56 Pfam Ribosomal protein L10 1 53 IPR001790 -
Seca12g04305 56 Gene3D - 1 56 IPR043141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04305 Seca-Chr12 117545413 117545731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04305 1 55 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 67.273 3.22e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04305 K02941 - nnu:104590633 82.4185