Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04274 ATGATATCTGTTATCTTCATTCTAATAACTCTTTTCACATCCCAAGCTGTGGCTGATTGTGAAACTGAATCAAAAAACAGCTGTGTTAACAAAGAAAAGGCTCTGCCTCTTAAAGTCATAGCCATATTTGCCATATTAGTTACTAGCATGATTGGTGTGTGTTTTCCATTGGTGACACGTTCAATCCCTGCCTTAAGCCCTGAAAACAATCTCTTTATAATAGTGAAGTGCTTTGCGGCTGGTATTATTCTAGGGACAGGGTTCATGCATGTGCTTCCTGATTCATTTGACATGCTTTGGTCTGATTGCTTGCAAGAGAAACCATGGCATGAGTTTCCATTTTCAGGACTTGTGGCTATGTTCTCTGCTATTATCACAATGATGGTGGATTCTTTGGCTACTAGTATTTATAGCAAAAAAGAGAGCAACCCTGCAGGTGAGGATCAAGAAATGGGTGTTGTCAATTTTGGGCATTTCCATGGTCACCAGCACCTTCCTCATGATGTTAAGGCAGATAGTGGAGAGTCACAACTTCTGCGTTACCGTGTAGTGGCCATGGTATTAGAACTTGGAATTATTGTTCACTCAGTGGTGATAGGACTTTCCTTGGGAGCCTCAAATAACACATGCACAATTAAAGGTCTTGTAGCTGCCCTTTGCTTCCATCAAATGTTTGAAGGCATGGGTCTTGGTGGCTGCATTCTCCAAGCCGAGTACAAGTTCTTAAAGAAGGCCATCATGGTGTTGTTCTTCTCAATTACAACCCCACTTGGAATTGCCTTAGGACTTGCATTGTCCACCAGCTACAAAGAGAACAGTCCAAAAGCACTAATCACTGTTGGATTGCTTAATGCATCATCAGCTGGTCTTTTAATCTACATGGCTTTGGTTGACCTGCTCTCTGCTGATTTCATGAGTCCAAGGCTGCAGGGTAACATTAAGCTTCAATTAAAATCTTATGTAGCGGTATTTTTGGGTGCTGATTGTGCAACAGAATCAGCAGATAGTTGCAATAACAAAGAAAAAGCTCTGCCTCTTAAAATCATAGCCATCTTTGCCATATTAGTCACTAGCATGATTGGTGTGTGCTTACCCTTGATGACACGTTCAGTCCCTGCCTTAAGCCCTGAAAGCAATCTCTTCATAATAGTGAAGTGTTTTGCAGCTGGTATTATTCTAGGGACAGGGTTCATGCATGTGCTTCCTGATTCATTTGACATGCTTTGGTCTGATTGCTTGCAAGAGAAACCATGGCATGAGTTTCCATTTTCAGGACTTGTGGCTATGTTCTCTGCTGTTATCACAATGATGGTTGACTCTTTGGCTACTAGTATTTATAGTAAAAAGGCTAAAACTGGAGTTATTCCAGAGAGGAGCCCTGCAGGTGGGGATCAAGAAATGGGTGTTGTCAATTTTGGGCATTTGCATGGTCACCAACACTCTCATCATGATGTCAAGACAGATAGTGCAGAGTCACAGCTTCTGCGTTACCGTGTAGTCGCCATGGTATTAGAACTTGGAATTGTTGTTCATTCAGTGGTGATAGGACTTTCCATGGGAGCCTCAAATAACACATGCACAATTAAAGGTCTTGTAGCAGCCCTTTGCTTCCATCAAATGTTTGAAGGCATGGGTCTTGGTGGGTGCATTCTCCAGGCTGAATACAACTTTTTAAAGAAGGCTATCATGGTGTTCTTCTTCTCAGTTACAACCCCACTTGGAATTGCCTTAGGAATTGCAATGTCCACCACCTATAAAGAGAACAGTCCAAATGCACTAATCACTGTTGGGTTGCTTAATGCATCATCTGCTGGTCTTTTAATCTACATGGCTTTGGTTGACCTGCTCTCTGCTGATTTCATGAGTCCAAGGTTGCAGGGAAGCATTAAGCTTCAATTAAAATCTTACATAGCGGTATTTTTGGGTGCTGGTGGCATGTCTCTCATGGCGAAATGGGCCTAA 1962 0.422 MISVIFILITLFTSQAVADCETESKNSCVNKEKALPLKVIAIFAILVTSMIGVCFPLVTRSIPALSPENNLFIIVKCFAAGIILGTGFMHVLPDSFDMLWSDCLQEKPWHEFPFSGLVAMFSAIITMMVDSLATSIYSKKESNPAGEDQEMGVVNFGHFHGHQHLPHDVKADSGESQLLRYRVVAMVLELGIIVHSVVIGLSLGASNNTCTIKGLVAALCFHQMFEGMGLGGCILQAEYKFLKKAIMVLFFSITTPLGIALGLALSTSYKENSPKALITVGLLNASSAGLLIYMALVDLLSADFMSPRLQGNIKLQLKSYVAVFLGADCATESADSCNNKEKALPLKIIAIFAILVTSMIGVCLPLMTRSVPALSPESNLFIIVKCFAAGIILGTGFMHVLPDSFDMLWSDCLQEKPWHEFPFSGLVAMFSAVITMMVDSLATSIYSKKAKTGVIPERSPAGGDQEMGVVNFGHLHGHQHSHHDVKTDSAESQLLRYRVVAMVLELGIVVHSVVIGLSMGASNNTCTIKGLVAALCFHQMFEGMGLGGCILQAEYNFLKKAIMVFFFSVTTPLGIALGIAMSTTYKENSPNALITVGLLNASSAGLLIYMALVDLLSADFMSPRLQGSIKLQLKSYIAVFLGAGGMSLMAKWA. 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04274 653 PANTHER ZINC/IRON TRANSPORTER 34 327 - -
Seca12g04274 653 NCBIfam ZIP zinc/iron transport family 329 653 IPR004698 GO:0005385|GO:0016020|GO:0071577
Seca12g04274 653 NCBIfam ZIP zinc/iron transport family 20 327 IPR004698 GO:0005385|GO:0016020|GO:0071577
Seca12g04274 653 Pfam ZIP Zinc transporter 346 650 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Seca12g04274 653 Pfam ZIP Zinc transporter 37 327 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04274 Seca-Chr12 116721485 116734415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04274 328 653 Inorganic Solute Cotransporters AT1G31260 65.373 1.18e-152 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04274 K14709 - gmx:100795511 545.814