Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04216 ATGAAGCTGGGGCTGGGAATCATCCTCATTTCTCTATTGCTCGTGTTGCGCGCCCCATTTTCTTCTTCTTCGAAACCCAAAGACCCATTCCTCGGAATCGCTCCTGAAGATGACAAATATTACAAGTCTTCCGATGTAATAAAATGCAAAGATGGATCCGGAAAATTCAGCAAAGCGCAACTCAATGACGACTTCTGCGACTGCCCTGATGGCACTGATGAGCCTGGTACATCAGCATGTCCGCGTGGAAAATTTTTTTGTCGGAATGCAGGGCACGTTTCTACTTACCTGTTCTCATCTAGAGTCAATGATGGAATTTGCGATTGCTGTGATGGAACCGATGAATATGATGGTAGAACAAAGTGCCCAAATACCTGCTGGGAGGCTGGGAAAGTTGCTCGAGATAAGCTGAAGAAAAAGATTGCCACATACCAAGAGGGTGTTAAATTGCGAAAGCAAGGAGCTGAACAAGCTAAATTAGCTCTGGAGAAGGATGAGGCAGAACTTTCAAAATTGAAAAAAGAAGAAAGTACACTTAAAGGGATTGTGCAACAGCTAAAGGAGCATAAAGAGCAAATAGAGAAGGCAGAGGAGAAGGAGCGTTTACGGAAGGAAAAAGAAGAGAAGCAGAAAAAGGAGGCTGAGGAGAAGGCTAATGAAAAACAAATTAAAGCTGATGAAGAAGATTTGGGACATAAAAATGAAGATGGGAAGCATTCACATGTTGAAGACAATGCTGTGGCAAGTGACCATGATAAAATTGAAATTCCAGAGGATTCTCCCACACAGCAGGATGAAACAGAGGACAAGTTAGAAGACACACTTGATAATCATGGTGGAGCCACTGATAGTCCTGAAAGTGAAGGATCTTTGCTTAATAAAGTGGAAGAGAATGCAAAAGAAGCTGAGGGAGAACCTGCTGTTAAATCAGAAAAAGATCTTATGACTGGAAAGAAAGAGTCTTCTGATGGTGTCATCAATACGGGGGAAGATGTATCTGAAAATACTGAGGAATTATCAAAGGAGGAATTGGGCAGGCTTGTTGCTTCTCGTTGGACTGGAGGAGATGTTAGTCAGAAAAGTGCTGAAGCTGATACCACATCAAACAATGAAGATCAGGAAGATCTTCCAAACGAGACAAATAACGAAGAATATGAAGGCTATGCTTCTGAAACTGATGATGACAATCACAAATATGACGAAGATGAAAATGATGAAGAATTTCAAGAGGATGAGCATGACCTTAGTTCCTCCTACAAATCTGACACTGATACTGAGCCAGACTTGTCAGATGGTACCACAACAGATAATCCTTCTTGGTTAGAGAAAGTACAAAAGACTGTATGGAATATTTTTCAGGCTGTTAATATATTCCAGGCTCCAGTGAACCAGTCAGATGCTGCTCGTGTACGCAAGGAATATGATGAATCAAGTACCAAATTGTCTAAAATACAGTCTAGAATATCGAGCCTGACGCAAAAGCTAAAACATGATTTTGGTCCAGAGAAGGAGTTCTATTCATTCTATGATCGTTGCTTTGAGGGCAAGCAGAACAAGTACACTTACAAGGTCTGCCCCTATAAACAGGCTTCTCAAGAGGAGGGCCATTCCACCACCCGTTTGGGTCGCTGGGACAAATTTGAGGATTCATACAAAATAATGGTGTTTTCTAATGGTGATAAATGCTGGAATGGTCCTGATAGGAGTTTGAAGGTCAAGCTGAAATGTGGGTTGAAGGATGAGATTACTGATGTAGATGAACCAAGCCGTTGCGAGTATGTAGCTTTACTAGCAACCCCAGCCCTTTGTCAGGAGGAAAAGCTGAAGGAGTTGCAACACAAGCTAGACGTACTTAATTCGGAACAACCAGAAAACCATGATGAATTGTGA 1890 0.419 MKLGLGIILISLLLVLRAPFSSSSKPKDPFLGIAPEDDKYYKSSDVIKCKDGSGKFSKAQLNDDFCDCPDGTDEPGTSACPRGKFFCRNAGHVSTYLFSSRVNDGICDCCDGTDEYDGRTKCPNTCWEAGKVARDKLKKKIATYQEGVKLRKQGAEQAKLALEKDEAELSKLKKEESTLKGIVQQLKEHKEQIEKAEEKERLRKEKEEKQKKEAEEKANEKQIKADEEDLGHKNEDGKHSHVEDNAVASDHDKIEIPEDSPTQQDETEDKLEDTLDNHGGATDSPESEGSLLNKVEENAKEAEGEPAVKSEKDLMTGKKESSDGVINTGEDVSENTEELSKEELGRLVASRWTGGDVSQKSAEADTTSNNEDQEDLPNETNNEEYEGYASETDDDNHKYDEDENDEEFQEDEHDLSSSYKSDTDTEPDLSDGTTTDNPSWLEKVQKTVWNIFQAVNIFQAPVNQSDAARVRKEYDESSTKLSKIQSRISSLTQKLKHDFGPEKEFYSFYDRCFEGKQNKYTYKVCPYKQASQEEGHSTTRLGRWDKFEDSYKIMVFSNGDKCWNGPDRSLKVKLKCGLKDEITDVDEPSRCEYVALLATPALCQEEKLKELQHKLDVLNSEQPENHDEL. 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04216 629 MobiDBLite consensus disorder prediction 368 412 - -
Seca12g04216 629 MobiDBLite consensus disorder prediction 197 279 - -
Seca12g04216 629 MobiDBLite consensus disorder prediction 293 319 - -
Seca12g04216 629 ProSiteProfiles MRH domain profile. 510 605 IPR044865 -
Seca12g04216 629 Coils Coil 601 621 - -
Seca12g04216 629 Coils Coil 155 229 - -
Seca12g04216 629 MobiDBLite consensus disorder prediction 197 438 - -
Seca12g04216 629 MobiDBLite consensus disorder prediction 413 427 - -
Seca12g04216 629 Pfam Glucosidase II beta subunit-like protein 471 628 IPR036607 -
Seca12g04216 629 Pfam Glucosidase II beta subunit-like 26 174 IPR028146 -
Seca12g04216 629 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 10 629 IPR039794 -
Seca12g04216 629 SUPERFAMILY Mannose 6-phosphate receptor domain 512 603 IPR009011 -
Seca12g04216 629 Gene3D - 505 603 IPR009011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04216 Seca-Chr12 115354653 115364884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04216 21 629 Calmodulin-binding Proteins AT5G56360 58.599 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04216 K08288 - gmx:100807083 923.309