Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04186 ATGTCAACGGAGAAGGAGAGAGAGACTCAGGTTTACATGGCCAAGCTTTCAGAGCAGGCCGAGAGATATGAAGAAATGGTTGAATGCATGAAAAAAGTAGCAAAACTTGATCTTGAGCTAACTGTAGAAGAGAGGAACCTCCTCTCAGTGGGATATAAAAATGTCATTGGTGCACGGAGAGCCTCTTGGCGCATTATGTCTTCAATTGAACAGAAGGAAGAGTCTAAAGGAAATGAGAACAATGTGAAACTGATCAAGAGTTACTGCCAAAAGGTCGAGGAGGAACTATCCAAAATTTGCGGTGACATTCTCACAATCATTGACCAGCATCTGATTCCTTCTTCCACCTCAGGAGAAGCTACCGTTTTCTACTATAAGATGAAAGGTGACTATTATCGATATCTTGCTGAGTTCAAGACAGACCAAGACAGGAAGGAGGCAGCTGAGCAGTCACTAAAGGCATATGAGGCTGCTTCAGCCACCGCAAACACAGATCTTCCATCAACACATCCAATCCGTCTTGGACTTGCACTCAACTTTTCAGTTTTCTATTATGAGATAATGAACTCTCCTGAAAGGGCGTGTCATCTGGCTAAACAAGCTTTTGATGAGGCAATTGCGGAGTTAGACACATTGAGTGAAGAGTCATACAAAGATAGTACTTTGATAATGCAGTTGTTGAGAGACAACATGACTCTCTGGACCTCTGATTTACCTGAGGATGGAGGTGAAGAATTCAAAACAGAAGAAGCCAAACCTGCTGAACCAGAGGTATGTGTATAA 783 0.4266 MSTEKERETQVYMAKLSEQAERYEEMVECMKKVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENNVKLIKSYCQKVEEELSKICGDILTIIDQHLIPSSTSGEATVFYYKMKGDYYRYLAEFKTDQDRKEAAEQSLKAYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNMTLWTSDLPEDGGEEFKTEEAKPAEPEVCV. 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04186 260 Coils Coil 13 33 - -
Seca12g04186 260 MobiDBLite consensus disorder prediction 240 260 - -
Seca12g04186 260 Pfam 14-3-3 protein 13 235 IPR023410 -
Seca12g04186 260 Coils Coil 195 215 - -
Seca12g04186 260 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Seca12g04186 260 PIRSF 14-3-3 1 247 IPR000308 -
Seca12g04186 260 Coils Coil 138 165 - -
Seca12g04186 260 SMART 1433_4 7 248 IPR023410 -
Seca12g04186 260 PANTHER 14-3-3 PROTEIN 7 237 IPR000308 -
Seca12g04186 260 FunFam 14-3-3 protein epsilon 1 249 - -
Seca12g04186 260 Gene3D - 1 246 IPR036815 -
Seca12g04186 260 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Seca12g04186 260 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Seca12g04186 260 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Seca12g04186 260 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Seca12g04186 260 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Seca12g04186 260 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Seca12g04186 260 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04186 Seca-Chr12 114972768 114975576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04186 2 255 14-3-3 family AT1G26480 85.000 6.74e-164 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04186 K06630 - gmx:100529129 478.018