Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04181 ATGAGTCCTAGAAAGAAGTGGAAGAAGCAACGGAGGAGACACACATTACCGCCAAAAAGATATATGAAAGGTTTGGTATGTCAGGTTACGAACCTATGGTCATTATTGATCTTCATGTTTTTTTATATGAGAAGACAAAGTAAGATTTTTCCTCCACAATCCATTTCCATCATCAGAAATTTAATAGAACTCAGTCTCTCAGATGTGAAAATTATGAAATCATTGCTGAATGCAGATTTAATTTCTTTTCACACATTTGACTATGCTTGCCATTTTCTATCTTGCTGCAGACAAATGTTTGGCTTGGAATATGAATCGAAAAGGGGTTGCACTGGGGTTGAATACTTGACCATACAATATTCATGA 366 0.3552 MSPRKKWKKQRRRHTLPPKRYMKGLVCQVTNLWSLLIFMFFYMRRQSKIFPPQSISIIRNLIELSLSDVKIMKSLLNADLISFHTFDYACHFLSCCRQMFGLEYESKRGCTGVEYLTIQYS. 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04181 121 Gene3D Glycogen Phosphorylase B; 49 120 - -
Seca12g04181 121 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 67 115 IPR001830 GO:0003824|GO:0005992
Seca12g04181 121 Pfam Glycosyltransferase family 20 70 114 IPR001830 GO:0003824|GO:0005992
Seca12g04181 121 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 71 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04181 Seca-Chr12 114682059 114683247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04181 70 115 Trehalose Biosynthesis Gene Families AT1G06410 69.565 8.92e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04181 K16055 - cpap:110822041 78.5666