Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04140 ATGAGGGACCAAAAAACTCTATTGGAATTGATGGCAAATATTTCAAATTGGAAAACACGACAAGCCATGTCTTCCAAACCCTTCAAGCCTCACATTTTGGATGTGACGATATCCCAGCTTGCACCAATATTTTATAGTGAAGCGGAACTTGCTCAAATCAAGAAATTCCATGAGGTGCATTTAAAGGCTACAACAACATTGGAAAATATTGATAACGTGAGGATGACCAGGAAAAGGTACATACAAATTGAAGACATACTTGATGAAGAAGAAATACCCACACCGGTAAGTAAAAAATCAAGAAAAATTGTGTCAAAGAAAGCCCCATCACCAGCACCACCACCAAATATGCCTACAAAATTCAAAAATCGGATTGCAGAATTAAATGGGTATGATATTAATTTTCTCATGCATAAGAAACTTTACAAGAGTGACGTGTGCACAAATAACAACCGCCTGTCAATGCCACAAAATCAACTTGTGCCTGATTTCCTCACGGAGGATGAGAAAATAACATTGGATACGAAAAAAGGTATTGAGGTGACTATTTTGGATTCACATCTTAGAGAGTTTTCTTTAATCTTAAAGAAGTGGAAGATGAAGAAAGCATGCATCTACAATCTAATACAAAGTTGGAACAAAGTTGTGCTTCACAATAATTTCAAAAGTGACCATCAACTCCAAATATGGTCTTTTAGGGTCAACGGTAAATTATATTTTTTATTAGACAAGCCCTGA 738 0.3604 MRDQKTLLELMANISNWKTRQAMSSKPFKPHILDVTISQLAPIFYSEAELAQIKKFHEVHLKATTTLENIDNVRMTRKRYIQIEDILDEEEIPTPVSKKSRKIVSKKAPSPAPPPNMPTKFKNRIAELNGYDINFLMHKKLYKSDVCTNNNRLSMPQNQLVPDFLTEDEKITLDTKKGIEVTILDSHLREFSLILKKWKMKKACIYNLIQSWNKVVLHNNFKSDHQLQIWSFRVNGKLYFLLDKP. 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04140 245 Pfam B3 domain-containing protein At2g31720-like 118 216 IPR005508 GO:0003677
Seca12g04140 245 SUPERFAMILY DNA-binding pseudobarrel domain 134 243 IPR015300 -
Seca12g04140 245 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 68 244 IPR005508 GO:0003677
Seca12g04140 245 MobiDBLite consensus disorder prediction 97 119 - -
Seca12g04140 245 Gene3D - 127 244 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04140 Seca-Chr12 113769154 113769891 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04140 125 242 B3 DNA Binding Superfamily AT1G05930 30.159 8.98e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04140 - - gmx:102663171 212.616