Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04139 ATGAGGGACCAAAAAACTCTATTGGAATTGATGGCAAATATTTCAAATTGGAAAACACGACAAGCCATGTCTTCCAAACCCTTCAAGCCTCACATTTTGGATGTGACGATATCCCATCTTGCACCAATATTTTATAGTGAAGCGGAACTTGCTCAAATCAAGAATTTCCATGAAGTGCATTTAAAGGCTACAACAACATTGGAAAATATTGATAATGCGAGGATGACCAGGAAAAGGTACATACAAATTGAAGACATACTTGATGAAGAAGAAAGACCCACACCGGTAAGTAAAAAATCAAGAAAAATTGTGTCAAAGAAAGCCCCATTACCAGCACCACCACCAAATATGGCTACAAAATTCAAAAATTGGATTGTAGAATTAAATGGGTATGATATTAATTTTCTCATGCATAAGAAACTTTACAAGAGTGACGTGTGCACAAATAATAACCGTCTGTCAATGCCACAAAATCAACTTGTGCCTGATTTCCTCACGGAGGATGAGAAAATAATATTGGATATGAAAAAAGGTATTGAGGTGACTATTTTCGATTCACATCTTAGAGAGTTTTCTTTAATCTTAAAGAAATGGAAGATGAAGAAAGCATGCATCTACAATCTAATACAAAGTTGGAACAAAGTTGTGCTTCACAATAATTTCAAAAGTGACCATCAACTTCAAATATGGTCTTTTAGGGTCAACGGCAAATTATATTTTTTATTAGACAAGCCCTGA 738 0.3482 MRDQKTLLELMANISNWKTRQAMSSKPFKPHILDVTISHLAPIFYSEAELAQIKNFHEVHLKATTTLENIDNARMTRKRYIQIEDILDEEERPTPVSKKSRKIVSKKAPLPAPPPNMATKFKNWIVELNGYDINFLMHKKLYKSDVCTNNNRLSMPQNQLVPDFLTEDEKIILDMKKGIEVTIFDSHLREFSLILKKWKMKKACIYNLIQSWNKVVLHNNFKSDHQLQIWSFRVNGKLYFLLDKP. 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04139 245 Gene3D - 127 244 IPR015300 -
Seca12g04139 245 Pfam B3 domain-containing protein At2g31720-like 128 216 IPR005508 GO:0003677
Seca12g04139 245 SUPERFAMILY DNA-binding pseudobarrel domain 134 243 IPR015300 -
Seca12g04139 245 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 69 244 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04139 Seca-Chr12 113756852 113757589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04139 127 242 B3 DNA Binding Superfamily AT1G05930 31.452 3.89e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04139 - - gmx:102663171 210.305