Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04057 ATGAGGGTAATGGGGATTCCAGGACTCACTTTGTACCACCTTAAGAGCCATTTACAGAAATATAGACTTGGGAAAAGCCAACAGCTAGAAACCTGCTCTGACAACAAACAACAAGATTACAGAGAAATCCAGAACAGTAATGTTCATTCCAGCAGTATTGGGACCCAGAATGAGATGACTGAAAGCTTGAAGATTTCTCAGGCTCTCCAAGTGCAAATGGAAGTGCAGAAGAAACTCTATGAACAAATAGAGGTGCAGAAACATTTACAGCTTAGGATTGAAGCTCAAGGGAAGTACTTACAATCAGTACTAATGAAGGCACAGGAAACACTTACAGGATACAGTACTTCTACAATGGGTGTAGAACATGCAAAAGCTGAACTTTCTCAGCTATTATCAATAATCAACAATGCATGTCCAAGTTCTCCCATTTCAGAACTTACAGAAACAAGAGGGTTTAGTTCAAACTATGGTGGGGAAAGAAAACAAAACAGAGGAACTATGTGTTCACTAGAAAGTTCTCTGACATCATCTGAAAGCTCTGGGACAAAAGAAGAAGAAGACCAACCCATGAATGAGGCAGAGAACCCTCAAAGGTGTAATAGTGTTTCAGTTGAATTGCCATTGTTGGCTATTCATACAGAAGAAAAAGCATTCAAGTCAGATACAAGTGATGGAGCTAATGGGAGAAAGAGAAGTGTAGTAGCAACTGATTCTGATGGTACTAACTGCATTGATCAAGCATCTGGAGAAACATGTGGCAACAAGTTGAGGAAATATGAATTGTCAGAAATGATTGACTTGAACAGAGACAATGACTCAAGTTCTAAAGAAATTATAGATTTAAATTGCAGTTCAAGCTTTTGGGAACACTGA 876 0.3893 MRVMGIPGLTLYHLKSHLQKYRLGKSQQLETCSDNKQQDYREIQNSNVHSSSIGTQNEMTESLKISQALQVQMEVQKKLYEQIEVQKHLQLRIEAQGKYLQSVLMKAQETLTGYSTSTMGVEHAKAELSQLLSIINNACPSSPISELTETRGFSSNYGGERKQNRGTMCSLESSLTSSESSGTKEEEDQPMNEAENPQRCNSVSVELPLLAIHTEEKAFKSDTSDGANGRKRSVVATDSDGTNCIDQASGETCGNKLRKYELSEMIDLNRDNDSSSKEIIDLNCSSSFWEH. 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04057 291 Gene3D - 1 26 - -
Seca12g04057 291 MobiDBLite consensus disorder prediction 146 200 - -
Seca12g04057 291 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 1 197 IPR044848 GO:0003700
Seca12g04057 291 MobiDBLite consensus disorder prediction 146 180 - -
Seca12g04057 291 Pfam MYB-CC type transfactor, LHEQLE motif 64 110 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04057 Seca-Chr12 108730982 108732491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04057 1 247 G2-like Transcription Factor Family AT1G69580 46.388 7.24e-56 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04057 - - gmx:100776601 357.451