Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04056 ATGCCGTATGCAGTTTCTCAAGGAGGGTGGTTGAGTTTTATCATGTTAATTATTTTTGCTATGATGTTTTGGTACACGGCTTTGCTTCTACAAAGGTGTATGAATAGACATCCACTAATCAAATCATATCCTGATATTGGTGAGGTTGCTTTTGGGTACAAAGGAAGAGCTCTGATAGCCACTATCATATATATAGAACTGTTTTTAATTGCAGTGGAGCTTCTTATATTAGGTGACAATTTGGAGAAGCTGTTTCCAAATATGAACTTCAAAATTGTTGGCCATAGAATTGAAGCCAAAAGAGGTTTTGTCCTACTCGCTGCTTTGGTTATATTACCAACAACATGGTTGAGAAGCTTGGCAGCCCTGGCCTACATTTCTATTGGTGGGGTAGTGGCTTCTATTATTTTAATTGTTTGTGTTGTGTGGGTGGGTGAAGTTGATGGTGTTGGCTTTCATGAAAGAGGTCAGTTAGTAAATTGGGGAGGATTGCCTACTTCTGTGAGCCTTTTCTCCTTTTGTTACACTGCACATGCATTAATGCCTACATTATGCAATTCCATGAAGGATAGAAGTCAGTTTCTTAAGGTTCTGTTGGTTTGCTTTGTGACAGGCACCATTAACTTTGCATCTGTTGCTATTTTAGGCTACATGATGTTTGGAGATGATCTGAAGTCTCAAATCACCTTAAATCTACCAACAAAGAAAATAAGTACTAAAATAGCAATTTATACCACAATAATCAATCCTTTCACTAAGTATGCTGTTTTAATCACCCCAATAGTGAATGGTATTGAAGATAAATGGCGTCTTTGCAAAAGAAGACCTGTTTCCATCTTTATTAGAACAACCATTGTGGTCAGCAGTGCATTTGTGACATTATTTGTTCCTTTTTTTGGATACATTATGGCGTTTATTGGTGCATTCCTATGTGTGGCAATCTCATTGTTGTTCCCTTGTATTTGCTACCTGAAGATAAACAAAGCTGCTCGACTATTTGGGTTAGAGTTGATCATTATCACAGGAATTCTGCTCATAGGTATGGTAATTGGAATATTGGGTACCTACATCTCTGTGAGTCAGATAGTGAATCATATGTGA 1101 0.3751 MPYAVSQGGWLSFIMLIIFAMMFWYTALLLQRCMNRHPLIKSYPDIGEVAFGYKGRALIATIIYIELFLIAVELLILGDNLEKLFPNMNFKIVGHRIEAKRGFVLLAALVILPTTWLRSLAALAYISIGGVVASIILIVCVVWVGEVDGVGFHERGQLVNWGGLPTSVSLFSFCYTAHALMPTLCNSMKDRSQFLKVLLVCFVTGTINFASVAILGYMMFGDDLKSQITLNLPTKKISTKIAIYTTIINPFTKYAVLITPIVNGIEDKWRLCKRRPVSIFIRTTIVVSSAFVTLFVPFFGYIMAFIGAFLCVAISLLFPCICYLKINKAARLFGLELIIITGILLIGMVIGILGTYISVSQIVNHM. 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04056 366 PANTHER OS05G0424000 PROTEIN-RELATED 1 352 - -
Seca12g04056 366 Pfam Transmembrane amino acid transporter protein 1 357 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04056 Seca-Chr12 108707269 108709406 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04056 1 363 Amino Acid or Auxin Permease AAAP Family AT3G28960 45.232 4.02e-121 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04056 K15015 - gmx:100812006 555.444