Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04054 ATGACTGCAGAGGATATGGAGAGTGAAAGCCAACTCCAAGTTTCAAATTCAGGACAACAAATTAAAGGAACCACTTTTTTCAAGACTTGTTTCAATGGACTCAACACCTTGGCAGGTATTGGAATACTGTCAATGCCGTATGCAGTTTCTCAAGGAGGGTGGTTGAGTTTTATCATGCTAATTATTTTTGCAATGATGTTTTGGTACACGGCTTTACTTCTACAGAAGTGTATGAATGGACATCCACTAATCAAATCATATCCTGATATTGGTGAGGTTGCTTTTGGGTACAAAGGAAGAGCTGTGATAGCCACTATCATATATATAGAACTGTTTTTAATTGCAGTGGAGCTTCTTATATTAGAAGGTGACAATTTGGAGAAGCTGTTTCCAAATATGAACTTCAAAATTGTTGGCCATAGAATTGAAGCCAAAAGAGGTTTTGTCCTACTCGCTGCTTTGGTTATATTACCAACAACATGGTTGAGAAGCTTGGCAGCCCTGGCCTACATTTCTATTGGTGGGGTAGTGGCTTCTATTATTTTAATTGGTTGTGTTGTGTGGGTGGGTGAAGTTGATGGTGTTGGCTTTCATGAAAGAGGTCAGTTAGTAAATTGGGGAGGATTGCCTACTTCTGTGAGCCTTTTCTCCTTTTGTTACACTGCACATGCATTAATGCCTACACTATGCAATTCCATGAAGGATAAAAGTCAGTTTCCTAAGGTTCTGTTGGTTTGCTTTGTGACAGGCACCATTAACTTTGCATCTGTTGCTATTTTAGGCTACATGATGTTTGGAGATGATATGAAGTCTCAAATCACCTTAAATCTACCAACAAAGAAAATAAGTACTAAAATAGCAATTTATACCACAGTAATCAATCCTTTCACTAAGTATGCTGTTTTAATCACCCCAATAGTGAATGGTATTGAAGATAAATGGCATCTTTGCAAAAGAAGACCTGTTTCCATCTTTATTAGAACAACCATTGTGGTCAGCAGTGCATTTATGGCATTATTTGTTCCTTTTTTTGGATACATTATGGCGTTTATTGGTGCATTCCTATGTGTGGCAATCTCATTGTTGTTCCCTTGTATTTGCTACCTGAAGATAAACAAAGTTGCTCGACTATTTGGGTTAGAGTTGATCATTATCACAGGAATTCTTCTCATAGGTACGGTAATTGGAATATTGGGTACCTACATCTCTGTGAGTCAGATAGTGAATCATATGTGA 1236 0.3778 MTAEDMESESQLQVSNSGQQIKGTTFFKTCFNGLNTLAGIGILSMPYAVSQGGWLSFIMLIIFAMMFWYTALLLQKCMNGHPLIKSYPDIGEVAFGYKGRAVIATIIYIELFLIAVELLILEGDNLEKLFPNMNFKIVGHRIEAKRGFVLLAALVILPTTWLRSLAALAYISIGGVVASIILIGCVVWVGEVDGVGFHERGQLVNWGGLPTSVSLFSFCYTAHALMPTLCNSMKDKSQFPKVLLVCFVTGTINFASVAILGYMMFGDDMKSQITLNLPTKKISTKIAIYTTVINPFTKYAVLITPIVNGIEDKWHLCKRRPVSIFIRTTIVVSSAFMALFVPFFGYIMAFIGAFLCVAISLLFPCICYLKINKVARLFGLELIIITGILLIGTVIGILGTYISVSQIVNHM. 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04054 411 PANTHER AMINO ACID TRANSPORTER 15 394 - -
Seca12g04054 411 Pfam Transmembrane amino acid transporter protein 23 406 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04054 Seca-Chr12 108661373 108664424 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04054 7 408 Amino Acid or Auxin Permease AAAP Family AT3G28960 46.914 3.51e-140 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04054 K15015 - gmx:100812006 619.387