Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04001 ATGTTTTTTAACATTACAACATTTGGTGCTAGACCAGCACCGAGTGTGGATGATTACAGTTCTAGAGGACCATCAACGACGATTCCATTTGTGTTGAAACCAGACATCACAGCTCCTGGTACTAAAATCTTAGCTGCATCCTCTCCTCTAGCCATGGGAGCTGGTTATGTAAACCCCAACAGAGCCCTTGACCCTCGACTTGTTTATGATGCACAAGTACAAGATTATGTTAATCTTCTCTGTGCAATGAACTTCACCCAAAAGAACATCGCAGCCATAACGAGATCCTCTTCTTATAATTGCTCTAATCCTCTTTTGGATCTCAACTACCCTTCTTTTATTGCTTTCTTCAATGAGAACAATAATTCTTCAGGGATAATACAAGAATTTCAGAGAACAGTGACAAATGTTGGGGAGGGAGATACGACCTATGTTGCTAGTGTTACTCCCATCAATGGGTTCCATATTAGCGTCATCCCCAACAAGTTGGTATTCAAAGGGAAGAACGAGAAGCTAAGCTACAAGTTGAGGATCAAAGGAACAAAAGTGACAAAAGAGATTAATGAAGTAAATTTTGGGTATCTCACTTGGACGGATGTGAAGCATGTTCTTAGGAGCCCTGTTGTGATCACTACCCTCAAATTTAAATCATAG 654 0.4052 MFFNITTFGARPAPSVDDYSSRGPSTTIPFVLKPDITAPGTKILAASSPLAMGAGYVNPNRALDPRLVYDAQVQDYVNLLCAMNFTQKNIAAITRSSSYNCSNPLLDLNYPSFIAFFNENNNSSGIIQEFQRTVTNVGEGDTTYVASVTPINGFHISVIPNKLVFKGKNEKLSYKLRIKGTKVTKEINEVNFGYLTWTDVKHVLRSPVVITTLKFKS. 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04001 217 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 47 IPR045051 -
Seca12g04001 217 SUPERFAMILY Subtilisin-like 16 119 IPR036852 GO:0004252|GO:0006508
Seca12g04001 217 Gene3D Peptidase S8/S53 domain 10 48 IPR036852 GO:0004252|GO:0006508
Seca12g04001 217 Gene3D Peptidase S8/S53 domain 49 76 IPR036852 GO:0004252|GO:0006508
Seca12g04001 217 Gene3D - 80 213 - -
Seca12g04001 217 Pfam Fibronectin type-III domain 107 210 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04001 Seca-Chr12 106501234 106502125 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04001 3 46 Subtilisin-like Serine Gene Family AT5G67090 61.364 3.45e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04001 - - gmx:100786751 248.825