Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04000 ATGACTGAAATTCCTTCAAGATGGAGAGGCCAATGTGAAAATAGCATCCAATTTAACTCATCTCTATGCAACAAGAAACTCATCGGAGCAAGGTTCTACCCCAACATCACCATAGCAGATAATAACTCTACACGAGACAGAAATGGTCACGGGACTCACATATCATCCATCGCAGCTGGGAGCAGAGTTGAGGGTGCATCCTACTTTGGCCATGCCGCAGGATCAGCAACAGGAATTGCTTCAGGGGCTAAGATAGCCATGTACAAGGCCATTTGGGATATTGGAGCTGTGTCATCTGATATAATAGCTGCAATCGATTGTGCAATTTCAGATGGGGTAGATGTTCTTTCCTTATCAATTGGAATGCAAAGACAGACCCTATTGCAATAG 390 0.441 MTEIPSRWRGQCENSIQFNSSLCNKKLIGARFYPNITIADNNSTRDRNGHGTHISSIAAGSRVEGASYFGHAAGSATGIASGAKIAMYKAIWDIGAVSSDIIAAIDCAISDGVDVLSLSIGMQRQTLLQ. 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04000 129 Pfam Subtilase family 37 121 IPR000209 GO:0006508|GO:0008236
Seca12g04000 129 ProSitePatterns Serine proteases, subtilase family, histidine active site. 50 60 IPR022398 -
Seca12g04000 129 SUPERFAMILY Subtilisin-like 22 125 IPR036852 GO:0004252|GO:0006508
Seca12g04000 129 ProSiteProfiles Serine proteases, subtilase domain profile. 1 129 - -
Seca12g04000 129 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 124 IPR045051 -
Seca12g04000 129 Gene3D Peptidase S8/S53 domain 1 124 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04000 Seca-Chr12 106500339 106500752 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04000 3 121 Subtilisin-like Serine Gene Family AT5G67360 53.125 5.16e-37 131