Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03999 ATGGCTTCCAAAATTTTTCTGTCTTTGTGGTTCTCCTATATCGCAGTCCTTTTCCTCATTTCTCCAATATTGGCTCAGTCTTATGATAATTATATTATCCACATGGACTTATCAGCCATGCCTAAAGTATTCTCAAGCCAACGTAGTTGGTATGTATCCACTCTTTCCACTGCCTTAGATGGTTCTCAAGATACCACCAATAATCTTAACTCTGCCTCTTCTAAGCTGATTTATACATACACCAATGCCATGAATGGTTTCAGTGCAAGGGCATGGCCCGCAGCTGAATTTGGCAAGGATGTAATCATTGGTTTGGTGGACACTGGAGTTTGGCCAGAAAGTGAAATCTTCAGAGATAATGGCATGACTGAAATTCCTTCAAGATGGAAAGGCCAATGTGAAAATAGCATCCAATTTAACTCATCTCTATGCAACAAGAAACTCATCGGAGCAAGGTTCTTTGACAAAGGATTTCTAGCCACATACCCCAACATCACCATAGCAGATAATAACTCTACACGAGACACAAATGGTCACGGGACTCACACATCATCCATCGCAGCTGGGAGCAGAGTTGAGGGTGCATCATACTTTGGCTATACCGCAGGATCATCAACAGGAATTGCTTCAGGGGCTAAGATAGCCATGTACAAGGCCATTTGGGATATTGGAGCTGTGTCATCTGATATAATAGCTGCAATCGATTGTGCAATTTCAGATGGGGTAGCTGTTCTTTCCTTATCAATTGGAATGCAAAATCCAACTTTGTACACAGACCCTATTGCAATAGCCACATTTGCAGCAGTGGAGAAAGGCATTTTTGTGTCTGCATCAGCAGGGAACAGTGGTCCTTCCTTTGAAACTCTGGATAATGATGCACCATGGTTGACGACCGTGGCTGCAGGCACTTTAGATCGACAATTTAACGGCACTCTTACACTTGGAAATGGTGTCTCAATCTCTGGCTTTACTTTCTATCTAGGAAACAACTCTGCCATTGTTCCAATTGTTTTTATGGGCCTTTGTGACAATGTAGAGGAATTGATCAAAGTGAAGAGGAAGATTGTGGTGTGTGAAGACAAGAACGGAACCCTTGCTGATCAAGTGTCTAATGTGTACAAAGCAAAAGTGGCTGGGGTTGTGTTCATATCAAACAGCCCTAATGCTGTGTATTGTGCATCGAGTCAAATGCCATCAATCTTTATTAACCGCATAAATGGAGAAACTATAAAAGCTTACATCAAAAGTAAGTCTGATTCATCCAAAGCAAGCATGGTTTTTAAGATAACAACATTTGGTGCTAGACCAGCACCGAGTGTAGATGATTACAGTTCTAGAGGGCCATCAACGACGATTCCATTTGTGTTGAAACCAGACATCACAGCTCCTGGTACTAATATCTTAGCTGCATGGCCTCCAAATATTCCAGTGGATTATTCGATGGATTCCGGCACAGATCTCTATAGCAAGTTCAATTTTCAAATTGGGACATCCATGGCATCCCCTCATGTTGCAGGGGTGGGAGCACTTTTAAGAGGGATAATACAAGAATTTCAGAGAACGGTGACAAATGTTGGGGAGGGAGATACGACCTATGTTGCTAGTGTTACTCCCATCAATGGGTTCCATATTAGCGTCATCCCCAACAAGTTGGTATTCAAAGGGAAGAACGATAAGCTAAGCTACAAGTTGAGGATCAAAGGCGCAAAAGTGACAAAAGAGATTAATGAAGTAAATTTTGGGTATCTCACTTGGACGGATGTGAAGCATGTTATAGGAGCCCTGTTGTGA 1791 0.4216 MASKIFLSLWFSYIAVLFLISPILAQSYDNYIIHMDLSAMPKVFSSQRSWYVSTLSTALDGSQDTTNNLNSASSKLIYTYTNAMNGFSARAWPAAEFGKDVIIGLVDTGVWPESEIFRDNGMTEIPSRWKGQCENSIQFNSSLCNKKLIGARFFDKGFLATYPNITIADNNSTRDTNGHGTHTSSIAAGSRVEGASYFGYTAGSSTGIASGAKIAMYKAIWDIGAVSSDIIAAIDCAISDGVAVLSLSIGMQNPTLYTDPIAIATFAAVEKGIFVSASAGNSGPSFETLDNDAPWLTTVAAGTLDRQFNGTLTLGNGVSISGFTFYLGNNSAIVPIVFMGLCDNVEELIKVKRKIVVCEDKNGTLADQVSNVYKAKVAGVVFISNSPNAVYCASSQMPSIFINRINGETIKAYIKSKSDSSKASMVFKITTFGARPAPSVDDYSSRGPSTTIPFVLKPDITAPGTNILAAWPPNIPVDYSMDSGTDLYSKFNFQIGTSMASPHVAGVGALLRGIIQEFQRTVTNVGEGDTTYVASVTPINGFHISVIPNKLVFKGKNDKLSYKLRIKGAKVTKEINEVNFGYLTWTDVKHVIGALL. 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03999 596 Gene3D Peptidase S8/S53 domain 100 514 IPR036852 GO:0004252|GO:0006508
Seca12g03999 596 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 72 515 IPR045051 -
Seca12g03999 596 CDD Peptidases_S8_3 78 514 IPR034197 -
Seca12g03999 596 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 95 IPR037045 -
Seca12g03999 596 Pfam Fibronectin type-III domain 516 592 IPR041469 -
Seca12g03999 596 Gene3D - 305 433 - -
Seca12g03999 596 Pfam Subtilase family 98 512 IPR000209 GO:0006508|GO:0008236
Seca12g03999 596 CDD PA_subtilisin_like 311 414 - -
Seca12g03999 596 ProSitePatterns Serine proteases, subtilase family, serine active site. 496 506 IPR023828 -
Seca12g03999 596 PRINTS Subtilisin serine protease family (S8) signature 98 117 IPR015500 -
Seca12g03999 596 PRINTS Subtilisin serine protease family (S8) signature 495 511 IPR015500 -
Seca12g03999 596 PRINTS Subtilisin serine protease family (S8) signature 175 188 IPR015500 -
Seca12g03999 596 ProSiteProfiles Serine proteases, subtilase domain profile. 77 552 - -
Seca12g03999 596 Pfam Peptidase inhibitor I9 31 90 IPR010259 -
Seca12g03999 596 SUPERFAMILY Subtilisin-like 88 531 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03999 Seca-Chr12 106422149 106430009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03999 518 587 Subtilisin-like Serine Gene Family AT5G67090 40.000 1.81e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03999 - - gmx:100786751 632.484