Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03972 ATGTCTCATTGGAGAACCAGGGACTCGAGAGACAAAGAGAGAGAGCAGAGTGGTTCTCTATCTAAGGACAAGAAGAGCTGGAAATGGCTTCAAGACCACAATAATCCAGATGTTGACGGAGTTGCTCTGTTCAAATCTAAGATAAGGGAATTTTTCTGGAAACAGGCTTGTGGCAATGTGGCTGGACTGGTAGGATCATCGACCCAAGAAGTGGCTTCTGTGCCTCCAAATCAATCTTCTTCAGCAAGCGAAGCCACTCCCTCTGCCTTTGTCGACGTCGCCACCGGCCAACACTTCACCTATCAACAGCTCTGGACAACCGTCAACATCGTCGCCACCTCCCTCTCCGACATGGGAATTCATAAGGGCAACGTCATCTTCCTCCTCTCTCCCAGCTCCATCTATTTTCCCGTCGCCTGCCTCGCCCTCATGTCCCTCGACGCCATCATCACCACCACCAACCCTCTCAACACTATGCGCGAAATCGCCAACCCGGTCCTCGTCTTCACAATCCTTCCACTCGCTCCCAAAATCATGGTCGCATCACCTACCCTCCCAATCATTCTAATGGAAGCCGAATCAGCCACAGTCTCAATCTCAGGGGCTAAAATTGTAACGACATTGAATGAAATGATGAAGAAGGAACCGAAAACGAGTCAAGTGAGGGACCGACTTAACCATCATGACAAGACCACATTGCTGTACTCGTCTGGAACGACGAGACCTAGCAAAGGCATGATCTCTTCCCATGGGAACTTGATTGATAGCGATGGTTCAATTTGTTTTGAATCGGTTCAGTAA 801 0.4931 MSHWRTRDSRDKEREQSGSLSKDKKSWKWLQDHNNPDVDGVALFKSKIREFFWKQACGNVAGLVGSSTQEVASVPPNQSSSASEATPSAFVDVATGQHFTYQQLWTTVNIVATSLSDMGIHKGNVIFLLSPSSIYFPVACLALMSLDAIITTTNPLNTMREIANPVLVFTILPLAPKIMVASPTLPIILMEAESATVSISGAKIVTTLNEMMKKEPKTSQVRDRLNHHDKTTLLYSSGTTRPSKGMISSHGNLIDSDGSICFESVQ. 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03972 266 MobiDBLite consensus disorder prediction 1 29 - -
Seca12g03972 266 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 76 255 - -
Seca12g03972 266 SUPERFAMILY Acetyl-CoA synthetase-like 82 254 - -
Seca12g03972 266 Pfam AMP-binding enzyme 89 256 IPR000873 -
Seca12g03972 266 Gene3D - 67 262 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03972 Seca-Chr12 105440643 105442690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03972 74 254 Monolignol Biosynthesis Gene Families AT1G20510 52.062 6.48e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03972 K10526 - cit:102606631 202.216