Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03968 ATGAAACTGCTGAAAGAAATGCAAGAACATTGTGGCCCATTTGTAACCTTGCCTCAGGTGGCAACTTCCACTAGAAGAACAGCAACCTCCCAGATTCCAAACTATCCCAATCTTCCATCTCAGTTGTTGTGCCAAGTTAAAAATGTCACACTAAATGAAAAAGAGGTCTTTCCTATATCAGATTTTGGATCAAAGCATAGTAAAAATCCCAGTGAATATTTCTGCAAAACTTTGACTGCTAGTGACACAAGCACACATGGTGGATTTTCTATTCCACGCAGGGCAGCAGAAAAGCTTTTTCCTCAATTGAAACGTAAATTCCAACCGCTCTCCTTCAACAAACACTTCGTAAGTTTCTGCTCGTGGTCTTAA 372 0.4032 MKLLKEMQEHCGPFVTLPQVATSTRRTATSQIPNYPNLPSQLLCQVKNVTLNEKEVFPISDFGSKHSKNPSEYFCKTLTASDTSTHGGFSIPRRAAEKLFPQLKRKFQPLSFNKHFVSFCSWS. 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03968 123 SUPERFAMILY DNA-binding pseudobarrel domain 63 107 IPR015300 -
Seca12g03968 123 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 12 109 IPR044835 GO:0003677|GO:0006355|GO:0009725
Seca12g03968 123 Gene3D - 72 117 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03968 Seca-Chr12 105274972 105276582 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03968 1 109 B3 DNA Binding Superfamily AT1G19850 50.955 7.01e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03968 K14486 - gmx:100813003 160.999