Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03937 ATGAATTCCTACCAAGTTCACATGTTCCGCACTCCGTTTCGCGTTCTGACATCTCCATGCACAAAGCCACCAATCTTGCATCTCTTGCTTTCTCTTCCTCCCAACACAAACACATCCTTCTTCCCCTCACCAACCATCCTTTGCTCATCACTCAGCGACGACTCCTTTTCCATCCCTAAACCAACCCAGTTGGGTTACAGTCCTTCAGAGGAACTGTTCGGGCTGGATGTGGAACTCAAGCCAAGCAAGGCTAACTCTCAAACACCAGAACCAAGGTCCTGGTTTGGTCCAAATGGACAGTATATCAGAGAGCTACCTTGTCCAAGTTGCCGGGGAAGGGGTTATACTCCATGTACAGAGTGTGGAATAGAAAGATCAAGGTCAGACTGTCCAAAATGTAATGGGAAGGGTATACTGACTTGCCACCAGTGCTCTGGAGATCGTGTTATATGGGAAGAATCAATTGATGAACAACCATGGGAGAGAGCCCGTTCTAGTTCCCCGCTTAAAGTGAAGGAAGATGACGAAGTTGACAACTTAGACATAAAGCTAGATGTGAAGAAAAAATCCAAGCGCGTTTACCAGTCACCACCTCCTGAAGTTGGATTAAAGATTAGTCGTTCATTAAAAGTTAGTTGGCTGCTTAAATTATTTATTATGCTTGTTCTGGATTCTAATTGTTATAATGCTTATGTTTCACATTAA 705 0.4397 MNSYQVHMFRTPFRVLTSPCTKPPILHLLLSLPPNTNTSFFPSPTILCSSLSDDSFSIPKPTQLGYSPSEELFGLDVELKPSKANSQTPEPRSWFGPNGQYIRELPCPSCRGRGYTPCTECGIERSRSDCPKCNGKGILTCHQCSGDRVIWEESIDEQPWERARSSSPLKVKEDDEVDNLDIKLDVKKKSKRVYQSPPPEVGLKISRSLKVSWLLKLFIMLVLDSNCYNAYVSH. 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03937 234 Gene3D - 95 151 - -
Seca12g03937 234 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 104 152 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03937 Seca-Chr12 103812726 103817398 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03937 32 210 C2H2 Transcription Factor Family AT5G20220 65.054 6.01e-77 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03937 - - gmx:100800156 351.288