Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03883 ATGGGTGTAGGGGACTACTACAAGATCCTGAGGGTGAACCGTAATGCCACAGATGAGGAGCTGAAAAAGGCATATAAGAGGTTAGCCATGAAGTGGCACCCAGATAAGAACCATCAACAACACCAAGTCAAGAAAGAAGAAGCTGAGGCCAAATTCAAGCAGATTTCAGAGGCCTATGATGTCCTTAGCGATGCAAAGAAGCGCCAGATCTATGATTTCTATGGCCACTATCCCCTTAACTCTATGAAGATGAACAAGGAAAATGGTGATGGGGATGTTAAGATTCCCAAGGACGAGAAATTTGGGGTTGTTGAAAGCAAATTGGTGTGTACCCTTGAGGAACTTTACAAAGGTTGTAGAAGGAAATTGAAGATCTCAAGGGCTGTTCCTGATGAATTCGGAGTAATTTGA 411 0.4331 MGVGDYYKILRVNRNATDEELKKAYKRLAMKWHPDKNHQQHQVKKEEAEAKFKQISEAYDVLSDAKKRQIYDFYGHYPLNSMKMNKENGDGDVKIPKDEKFGVVESKLVCTLEELYKGCRRKLKISRAVPDEFGVI. 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03883 136 FunFam DnaJ-like subfamily B member 13 2 96 - -
Seca12g03883 136 Coils Coil 38 65 - -
Seca12g03883 136 Gene3D - 102 134 - -
Seca12g03883 136 SMART dnaj_3 4 67 IPR001623 -
Seca12g03883 136 Gene3D DnaJ domain 1 93 IPR036869 -
Seca12g03883 136 PRINTS DnaJ domain signature 7 25 IPR001623 -
Seca12g03883 136 PRINTS DnaJ domain signature 67 86 IPR001623 -
Seca12g03883 136 PRINTS DnaJ domain signature 47 67 IPR001623 -
Seca12g03883 136 PRINTS DnaJ domain signature 25 40 IPR001623 -
Seca12g03883 136 SUPERFAMILY Chaperone J-domain 3 82 IPR036869 -
Seca12g03883 136 ProSiteProfiles dnaJ domain profile. 5 75 IPR001623 -
Seca12g03883 136 CDD DnaJ 5 64 IPR001623 -
Seca12g03883 136 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
Seca12g03883 136 Pfam DnaJ domain 5 72 IPR001623 -
Seca12g03883 136 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03883 Seca-Chr12 101318871 101321400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03883 6 74 C2H2 Transcription Factor Family AT1G74250 36.232 1.83e-11 58.5