Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03865 ATGGCGCAGAGTGAGGTGAAGCTTATTGGCAAATGGTCCAGTCCTTACGTGATGAGGGCGAAGATTGCCCTCAACATCAAATCCCTTGAATATGAAAATTTTGAAGAGAACGAGACCTTGAACCCCAAAAGTGATCTTCTTCTTCAATCCAACCCTGTGTATGGCAAAGTCCCTGTTCTCATCCACCATGGCAAACCCATCTGTGAGTCTCTGATCATAGTTGAATACATAGACGAAACTTGGTCCACTGGTCCTTCTATTCTCCCCTCTGATGCTTATGATAGAGCAATTGCTCGGTTTTGGGCTGCTTACATAGACCAAAAGGTAACTTCTTCTGTAGTGATTTTTGTTTTTAGCATTATAGCTGTTGAATCAGAGGAGGAAAGGAAGCCATACTATGAGGTGATGGAAGAAGTGGTTGAGAGGATGGAGGATGCTTTTGAGAAATGCAGCAAAGGAAAGCCCTTTTTTGGTGGAGATAGTATTGGTTTTCTTGATATTGCTTTTGGGTGTTTCTTGGGATGGGTGAGTGTGCTAGAGCATATGTATGAAAGGAAAGTGCTGGATGAAGCAAAGGCTCCTTCTTTGGTGAAATGGGCTGAGAGATTTGCTGCTGACCCTGCTGTGAAGGGCCTTATTCCTGAGACTGACAGGCTTCTTAGGCTTGCTAAGATTTTTCAGATCAAATGGAGAGCTGCTATTGCCAAGAAGAAATAG 717 0.4351 MAQSEVKLIGKWSSPYVMRAKIALNIKSLEYENFEENETLNPKSDLLLQSNPVYGKVPVLIHHGKPICESLIIVEYIDETWSTGPSILPSDAYDRAIARFWAAYIDQKVTSSVVIFVFSIIAVESEEERKPYYEVMEEVVERMEDAFEKCSKGKPFFGGDSIGFLDIAFGCFLGWVSVLEHMYERKVLDEAKAPSLVKWAERFAADPAVKGLIPETDRLLRLAKIFQIKWRAAIAKKK. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03865 238 Gene3D - 88 234 - -
Seca12g03865 238 CDD GST_C_Tau 92 226 IPR045074 GO:0004364|GO:0006749
Seca12g03865 238 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 85 IPR004045 -
Seca12g03865 238 Pfam Glutathione S-transferase, C-terminal domain 115 207 IPR004046 -
Seca12g03865 238 SFLD Main.3: Omega- and Tau-like 2 232 IPR045073 -
Seca12g03865 238 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Seca12g03865 238 Pfam Glutathione S-transferase, N-terminal domain 5 79 IPR004045 -
Seca12g03865 238 CDD GST_N_Tau 6 81 - -
Seca12g03865 238 SFLD Main (cytGST) 2 232 - -
Seca12g03865 238 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 226 IPR010987 -
Seca12g03865 238 FunFam Glutathione S-transferase U9 88 233 - -
Seca12g03865 238 FunFam Glutathione S-transferase GSTU6 1 88 - -
Seca12g03865 238 Gene3D Glutaredoxin 1 87 - -
Seca12g03865 238 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 218 IPR045073 -
Seca12g03865 238 SUPERFAMILY GST C-terminal domain-like 87 224 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03865 Seca-Chr12 100675011 100676002 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03865 1 224 Glutathione S-transferase Gene Family AT1G10370 58.667 1.28e-86 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03865 K00799 - cam:101508281 360.533