Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03864 ATGACAAAGAGTGAGGTAAAGCTGTTGGGGGCATGGCAAAGTCCATTTGCTTTGAGAGCTCGGATAGCTCTTAACATCAAATCAGTGGAATATGAGTTCATTGAGGAATCATTTGAGCCAAAAAGCCAGCTTCTTCTTCAAACCAACCCTGTTTTCAAAAAAGTTCCTGTTCTCTTTCACAGGGACAAATCCATTTGCGAGTCTTTGGTCGTTGTGGAGTATGTGGATGAGGCCTGGTCCTTTGCCTCTCCCATTCTCCCTTCTGATCCTTATGACCGCGCCATTGCTCGATTCTGGGCTACCTATATTGATAACAATTGGTACCCGACAATGAGATCCATTAGAGGAGCAAAAGGAGAGGATGAGAGGCAGAGATTGATAGAGGAAGTGAGAGAAGGATTGGCATTGCTGGAGGATGCTTTTAAGAAAAGCAGCAAAGGCAAGGCCTTTTTTGGTGGTGACCAAATTGGGTTCTTAGATATTGTACTTGGTAGCTTCTTGGGGTGGCTTAGTGTGGTGGAGATAGCCAATGGGGTGAAATTGCTTGACCAAGACAACGCACCTGGGCTGGTGAAATGGGCTGAAAAGTTCTGTGCACATACTTCTGTCAAAGATATTATGCCAGAGACAGGGAAGCTTCATGAGTTTGCTAAGTTTCTATGGGCCAAGATGGATGCTTCTACTCCAAAATAA 693 0.4473 MTKSEVKLLGAWQSPFALRARIALNIKSVEYEFIEESFEPKSQLLLQTNPVFKKVPVLFHRDKSICESLVVVEYVDEAWSFASPILPSDPYDRAIARFWATYIDNNWYPTMRSIRGAKGEDERQRLIEEVREGLALLEDAFKKSSKGKAFFGGDQIGFLDIVLGSFLGWLSVVEIANGVKLLDQDNAPGLVKWAEKFCAHTSVKDIMPETGKLHEFAKFLWAKMDASTPK. 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03864 230 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Seca12g03864 230 SFLD Glutathione Transferase (cytosolic) 2 225 IPR040079 -
Seca12g03864 230 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 213 IPR045073 -
Seca12g03864 230 SFLD Main.3: Omega- and Tau-like 2 225 IPR045073 -
Seca12g03864 230 SUPERFAMILY GST C-terminal domain-like 85 219 IPR036282 -
Seca12g03864 230 Gene3D - 86 230 - -
Seca12g03864 230 FunFam Glutathione S-transferase U9 86 227 - -
Seca12g03864 230 FunFam Glutathione S-transferase GSTU6 1 86 - -
Seca12g03864 230 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Seca12g03864 230 Pfam Glutathione S-transferase, C-terminal domain 98 199 IPR004046 -
Seca12g03864 230 CDD GST_C_Tau 90 220 IPR045074 GO:0004364|GO:0006749
Seca12g03864 230 Gene3D Glutaredoxin 1 85 - -
Seca12g03864 230 CDD GST_N_Tau 6 79 - -
Seca12g03864 230 SUPERFAMILY Thioredoxin-like 6 109 IPR036249 -
Seca12g03864 230 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 220 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03864 Seca-Chr12 100611994 100613232 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03864 1 226 Glutathione S-transferase Gene Family AT1G10370 56.828 1.35e-92 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03864 K00799 - adu:110272419 347.821