Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03856 ATGATCCTCACATATGGTGCCAAGTATGTTGATAGTTGTATGGTTTCTGATGAACATTTTGTGATTGGCATTCCTGATAGTCTACCACTTGATGTTGCTGCATCTCTCCTTTGTGCCCGGATCACATTGTATAACCTTTTGAGATATTTTGGAATTGACAAACTTGATCCGTATGTGGGTGTGGTTACTCTTGGTGGACTAGGCCATATGGGTGTCAAGTTTGCCAAAGCTCTTGGAGCCAAGGTTACAATGATTAGTACCTCTCCTAACAAAAAGAAGGAAGCAATTGAGCAGTTAGGAGTTGACTTATTTGTGGTCAGCTATGAGCAAGATCAGATGCAGGCTGCAATGGGCACATTGCATGGTGCAAAACAACGTGATGAAATTTACAACTTCTAG 399 0.416 MILTYGAKYVDSCMVSDEHFVIGIPDSLPLDVAASLLCARITLYNLLRYFGIDKLDPYVGVVTLGGLGHMGVKFAKALGAKVTMISTSPNKKKEAIEQLGVDLFVVSYEQDQMQAAMGTLHGAKQRDEIYNF. 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03856 132 Gene3D - 39 122 - -
Seca12g03856 132 Gene3D - 12 38 - -
Seca12g03856 132 PANTHER ALDEHYDE REDUCTASE 2 122 IPR047109 GO:0016616
Seca12g03856 132 Pfam Zinc-binding dehydrogenase 66 124 IPR013149 -
Seca12g03856 132 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 28 118 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03856 Seca-Chr12 100116766 100117164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03856 1 122 Monolignol Biosynthesis Gene Families AT4G37980 54.198 4.20e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03856 K23232 - tcc:18611430 172.17