Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03828 ATGCGATTCTCTCCGATTCTGTGCGATTTCGATACTGCATACGATTTGCATCGCTGCAGGGTGGATTTGAATCGAATCGCGAAACGATCAAACAAGAAAGTGAAAGGAAAAGAATGTCCTGTCTCTCCAATAACTAATGTGCTTCCTCTATCTCTGGTGCTTCTCGTTTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAGAATGACATGGCCATAAACAATAACATGATAGATGTTTTGCAAGATCAGAAGTGGGAGTCTATTCCCTGGAAAAAGTTGCAGGTTGGAGACATTATCAAGGATGTTGGTTATCATGTTATTGTGAGTTGCAGTCCTCATGTCATGTGTTCAAAATATGCTATTGCCCTGTTGTATCCCATAAAGATTTTTACTGATTTGGTGAAATGGAACTTCTTTTTATCATCACTGATCCATTTCTAG 450 0.3933 MRFSPILCDFDTAYDLHRCRVDLNRIAKRSNKKVKGKECPVSPITNVLPLSLVLLVSLIKEAFEDWKRFQNDMAINNNMIDVLQDQKWESIPWKKLQVGDIIKDVGYHVIVSCSPHVMCSKYAIALLYPIKIFTDLVKWNFFLSSLIHF. 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03828 149 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 40 103 - -
Seca12g03828 149 Gene3D - 15 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03828 Seca-Chr12 99561752 99565343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03828 40 103 Primary Pumps ATPases AT1G59820 81.250 3.98e-32 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03828 K14802 - gmx:100787473 119.012