Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03812 ATGGATTGGATGCCTAGTGTTGGCAAGGAATTTGATGATCCTGAAGAAGCTTGGCTGTTTTGGGTAGAATACGGTTCAAGAATGGGTTTTGGGGTTAGAAAAAACTACTTCAACAAAAGGATGGAAGATGGCTCCATTACATCTTGTAGATTCGTTTGTTGTAAGGAGGGGAAGAAGAACAATAAGTCATCTTTGGTTAAAAAGCCCAGGGCTGATACAAGAACTGAGTGCCAAGCAAGAATAGCACTTGCTGTAAAAAATGGGAAGTTTGTAATTCATGAGTTTGTAGAGAATCATAACCACCCTTTACAACTTGTAGAAACAACACATATGCTAGCATCACACAGTAAAATTTTAGAAGTTCAAGCATATGAGATTGAAATGGCAGAGGACTCGGGATTGATGCAAAAGGCTTCATTTCAGCTTATGAGCACACATGCAGGAGGTAGAGCTAATCTTGGATATACACGGTTGGATGTGAAGAACTATCTCAAAGCAAGAAGACAACGTAGCATGGTGTATAGGGAAGCTGGTTGTCTCTTACAGTATTTTCAACGACAACTTTTGGAGAATCCATCATTTTACCATGCATATCAAATGGATTGTGATGAACAAATCACAAACGTATTTTGGGCCGATGCAAAATGA 648 0.392 MDWMPSVGKEFDDPEEAWLFWVEYGSRMGFGVRKNYFNKRMEDGSITSCRFVCCKEGKKNNKSSLVKKPRADTRTECQARIALAVKNGKFVIHEFVENHNHPLQLVETTHMLASHSKILEVQAYEIEMAEDSGLMQKASFQLMSTHAGGRANLGYTRLDVKNYLKARRQRSMVYREAGCLLQYFQRQLLENPSFYHAYQMDCDEQITNVFWADAK. 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03812 215 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 3 157 - -
Seca12g03812 215 Pfam FAR1 DNA-binding domain 20 104 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03812 Seca-Chr12 99100776 99101423 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g03812 FAR1 5.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03812 - - aprc:113870350 325.479