Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g03800 | ATGGAGTTTGACAGTGTCGTTTCTCTACCAAGGACGCCGGAGAACATCGACGGTTTTGTTCTGTCGCCGGAGGAATCCCAAGAGGTTCATGTTTTAGCCGTTGATGACAGCCTCGTTGATCGCAAGGTCATTGAACGCTTGCTCAAAGTCTTAGCTTGTAAAGGGGGTTTGAAGAATTTTTCATTGATTGGGAAAACTACAGTAACTGCAGTAGATAGTGGACTCAGAGCACTGCAATTCCTTGGACTTGACGAGCAGAAAATACCCTCTGAATCTAATCGTTTAAAGGTGGATCTAATAATCACAGATTACTGTATGCCTGGAATGACCGGTTATGAGTTGCTCAAGAAAATCAAGGAATCTTCAACTTTCAGAGAAATTCCAGTGGTGATTATGTCCTCTGAAAACATTTTGCCGCGCATAGACAGATGTTTGGAGGAAGGTGCAGAGGATTTCATAGTGAAGCCAGTGAAGTTATCTGACGTTAAGCGCTTGAAAGATTACATGACAACGAAAGAGGTTAAAGGCGAAGACAGAGGAATCAACAAAAGGAAGCTACCGGACACCTCTGATGTGTCATCATCACCACCGTCCACTTCCTCATCAACGCTTTCATCATCGTCGTCGTTACCTTCTTCTCCATCACCGTCATCTTCCCTTTCATCTTCACCCTCCGTGATTGACTCTCCAATCAGACGGCTTAAAATGACCAGCACTGGTTGA | 723 | 0.444 | MEFDSVVSLPRTPENIDGFVLSPEESQEVHVLAVDDSLVDRKVIERLLKVLACKGGLKNFSLIGKTTVTAVDSGLRALQFLGLDEQKIPSESNRLKVDLIITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKDYMTTKEVKGEDRGINKRKLPDTSDVSSSPPSTSSSTLSSSSSLPSSPSPSSSLSSSPSVIDSPIRRLKMTSTG. | 241 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g03800 | 240 | ProSiteProfiles | Response regulatory domain profile. | 30 | 170 | IPR001789 | GO:0000160 | |
Seca12g03800 | 240 | SUPERFAMILY | CheY-like | 29 | 164 | IPR011006 | - | |
Seca12g03800 | 240 | CDD | REC_typeA_ARR | 31 | 165 | - | - | |
Seca12g03800 | 240 | Gene3D | - | 29 | 203 | - | - | |
Seca12g03800 | 240 | Pfam | Response regulator receiver domain | 31 | 162 | IPR001789 | GO:0000160 | |
Seca12g03800 | 240 | MobiDBLite | consensus disorder prediction | 187 | 240 | - | - | |
Seca12g03800 | 240 | SMART | REC_2 | 29 | 169 | IPR001789 | GO:0000160 | |
Seca12g03800 | 240 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 29 | 194 | IPR045279 | GO:0009736 | |
Seca12g03800 | 240 | MobiDBLite | consensus disorder prediction | 174 | 240 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g03800 | Seca-Chr12 | 98525438 | 98526928 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca12g03800 | 23 | 232 | Response Regulator Gene Family | AT1G59940 | 60.369 | 1.41e-74 | 227 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Seca12g03800 | Response_reg | 1.1e-17 | CL0304 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g03800 | K14492 | - | gmx:100527828 | 287.345 |