Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03795 ATGACTCATAACCCTCTCCTCTTCCTTTTCCTCTTGGTAGCCTTTTCCTCATTGATACAATCCAAGTTGACCACCAATTACTACCAAAAATCTTGTCCCCAATTCTCAGACGTAATCCGAAAAACCGTGGCTGAGAAGCAACTTTCCTCACCCACCACGGCTGCTGCCACCCTCCGCCTTTTTTTCCATGACTGCATTGTTGGTGGTTGCGATGCCTCCATCCTTGTCACCACCAACTCCTTTAATAAGGCTGAACGTGATGCCGACATTAACCTCTCCCTCCCAGGAGATGGCTTCGATGTCGTCACACGCGCCAAGACTACTCTAGAGCTTGAATGCCCTGGAGTGGTCTCATGCGCGGACATTCTAGCTACCGCTGCACGTGACCTTGTTGTGATTGTTGGTGGGCCCTTCTATAAGTTGGGCCTGGGCCGAAAAGATGGCTTGGAATCTAAAGCAAGGAATACAGAAGGCCAGTTCCCAGAGCCCACCATGCCACTCTCTAAGGTAATAGACATCTTTAAGTCTAAAGGGTTCTCCGTTCAAGAGATGGTGGCTCTTTCAGGTGCACACACTATAGGTTTTTCTCATTGCAAAGAGTTTAGCTATAGGCTCTTCAACTTCAGCAAGAACAATGAATATGACCCTAAGTTTAACCCCGAATATGCTAAGGGGTTGAGGAAGTTGTGTGAGAACTACACCAAGGACCCAACCATGTCAGCGTTCAATGACGTGATGACACCTGGCAAGTTTGACAATATGTACTACAAGAACTTGAAGAGAGGGTTAGGGTTGTTGGCAACAGACAGTGCCTTGTTTGATGACAATAGGACCAGACCCTTTGTTGATATGTATGCTTCTAATGAAACCAAGTTCTTTCAGGATTTCGCTCGCGTCATGCATAAGGTTAGCATCTTGCAAATAAAGACTGGAAACAAAGGAGAGGTACGACACAGGTGTGATAATTTCAATGCGCTAGCTTAA 984 0.4634 MTHNPLLFLFLLVAFSSLIQSKLTTNYYQKSCPQFSDVIRKTVAEKQLSSPTTAAATLRLFFHDCIVGGCDASILVTTNSFNKAERDADINLSLPGDGFDVVTRAKTTLELECPGVVSCADILATAARDLVVIVGGPFYKLGLGRKDGLESKARNTEGQFPEPTMPLSKVIDIFKSKGFSVQEMVALSGAHTIGFSHCKEFSYRLFNFSKNNEYDPKFNPEYAKGLRKLCENYTKDPTMSAFNDVMTPGKFDNMYYKNLKRGLGLLATDSALFDDNRTRPFVDMYASNETKFFQDFARVMHKVSILQIKTGNKGEVRHRCDNFNALA. 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03795 327 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Seca12g03795 327 Gene3D - 26 324 - -
Seca12g03795 327 Pfam Peroxidase 41 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g03795 327 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g03795 327 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g03795 327 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g03795 327 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g03795 327 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g03795 327 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g03795 327 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g03795 327 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g03795 327 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g03795 327 FunFam Peroxidase 161 303 - -
Seca12g03795 327 FunFam Peroxidase 26 169 - -
Seca12g03795 327 Gene3D Peroxidase, domain 2 161 303 - -
Seca12g03795 327 ProSiteProfiles Plant heme peroxidase family profile. 22 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g03795 327 PANTHER - 6 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g03795 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Seca12g03795 327 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g03795 327 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g03795 327 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g03795 327 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g03795 327 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g03795 327 CDD secretory_peroxidase 22 321 IPR033905 GO:0004601|GO:0042744
Seca12g03795 327 SUPERFAMILY Heme-dependent peroxidases 23 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03795 Seca-Chr12 98094468 98095451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03795 4 326 Peroxidase AT5G47000 60.429 5.69e-147 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03795 K00430 - gmx:100781063 483.026