Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03722 ATGGATCTGGAACGTGGGATTCGCCAAAACTCTGCTAAGAAGAAAGAATCATGGATAACTGTTCTGAGTCTGGCATATCAGAGTCTTGGAGTTGTGTATGGAGAGATAAGCACTTCACCACTTTACGTGTACAGGAACACATTTGCTGAAAATATTGGTCACACAGAGACCAATGAAGAGATTTATGGGGTTTTGTCTTTGGTGTTCTGGACTTTTACATTGGTGCCTTTGGTGAAGTATGTGTTTATAGTGCTCAAAGCTGATGACAATGGTGAAGGTGGCACATTTGCACTGTACTCTTTGCTGTGTCGCCATGCCAGAGTTGGCTTATTGCCCAATTGCCAATTGGCAGATGAGGAGCTTTCTGAGTACAAGAGGGACAGCTATGGAGTAGCACCAGAGAGAAGCCTTGCCTCAAGGCTTAAGTCTATGTTGGAGAGGCACAAAATCTTGCAGAGGATTTTGCTGGTTCTGGCTTTGATAGGGACTTGCATGGTCATTGGTGTTGGTGTCCTTAAACCAGCTATTTCTGGTGATTATGACAAATTTTGTTTGTTTTGGTTTGAAATATGTATTTTGGGGTCTGTTAGTCACCCTGAGTTGTTTGAATTGAATGCAGTTTTCTCAGCGATGTCTGGCCTTGAGCTTTCAATGTCCAAGGAGCACCACAGATATGTAGAAGTTCCAGCCGCATGCATCATATTGATAGGCTTGTTTGCCCTTCAACGTTATGGCACCCACAGAGTTGGCTTCTTGTTTGCTCCCATAGTTGGTATATGGCTTTTCAGCATTGGTGCCATCGGTATCTACAATATTTTTTACTGGAATCCTCATGTATACCGAGCACTCTCTCCATATTACGGTTTCCAATTTTTAAAGAAGACTCAGAGAGGAGGTTGGATGGCCCTTGGTGGAATTTTGCTATGCATAACAGGATCAGAAACCATGTTTGCTGGCCTTGGGCACTTTTCACAACTATCAATCAAGATTGCTTTCACCTGTGTTGTTTATCCATCTTTAATTCTTGCGTATATGGGGCAAGCTGCTTATTTTTCTAGGCATCATGATGTTGAGCATGAGTATCACTTTGGTTTTTATGTATCTGTACCAGAGAAGTTGAGATGGCCTGTTCTGGTGATAGCCATACTTGCTGCAGTTGTGGGAAGCCAAGCCATCATTACAGGAACTTTCTCAATCATCAAGCAATGTTCTGCATTAAGTTGCTTCCCAAGAGTTAAAGTGGTTCATACTTCATCCAAAATTCATGGGCAAGTATATATCCCTGAGATCAACTGGCTGCTAATGCTCTTGTGTTTGGCTGTAACTATTGGTTTCAGAGACACAAAGCTTATGGGCAATGCACAAGGTTTAGCAGTTATCTCTGTGATGCTGGTGACCACATGTTTGATGTCACTCGTTATTGTACTCTGCTGGCACCAGAATGTTTTCCTTGCAATTGGGTTTGTTCTTTTATTTGGCACCATTGAGGCTCTCTTCTTCTCAGCTTGTGTTATCAAGTTCTTTGAAGGAGCATGGGTGCCAATTGTTTTGGCATTTGTGTTTCTGACTGTAATGTGTGTTTGGCACTATGGCACTCTCAAAAAGTATGAATTTGATGTTCAAAACAAGGTATCAGTCAACTGGCTACTAAGCCTTGGCCCTAGCTTAGGCTTTGTTCGAGTTCGAGGGATTGGCCTTGTGCACACTGAGCTAGTTTCTGGAATTCCTGCAATCTTCTCCCACTTTGTAACCAACCTGCCAGCATTCCACCAGATCCTGGTTTTCCTGTGCATCAAACATGTGCCAGTTCCTCATGTTAGGCCTGAGGAAAGGTTCCTAGTTGGTCGTGTAGGTCCAAGAGATTTCAGACTCTACAGGTGCATAGTGAGATATGGATACCATGATGTCCACAAAGATGATGTTGAGTTTGAGAAAGATCTTGTGGGGAGCATAGCAGAGTTCATAAGAACAGGAAGTGGTGGGTTCAAGTTCAACTCTTCAAATGATGATAATATTGAAAAGGGTGACAAAATGACAGTTGTTGGGGCATGTTCTAGCCATCCCATTTTGGTGAGTGAGCATACTGAGGATGATGATGTAGACTCAACTGAGATATCAGAGATAAAATCACCCAAGGTGACACAACAACCAAAGAAAAGGGTAAGGTTTATTGTTCCAGAGAGCACAAAGATTGACACTGGTGCAATGGAGGAGTTGCAGGAACTGATGGGAGCCAGGGATGTTGGGGTAGCTTACATTATAGGACAGTCCTACATGAGAGCCAAACCAGGGTCCAGCATGCTTAAGAAATTAGCTATTAATTTTGGGTATGAATTCTTAAGGAAGAATAGCAGATCACCCTCCTATGTACTCAGTGCTCCTCATGCATCATCTTTGGAAGTTGGGATGATGTACCAAGTTTAA 2424 0.4274 MDLERGIRQNSAKKKESWITVLSLAYQSLGVVYGEISTSPLYVYRNTFAENIGHTETNEEIYGVLSLVFWTFTLVPLVKYVFIVLKADDNGEGGTFALYSLLCRHARVGLLPNCQLADEELSEYKRDSYGVAPERSLASRLKSMLERHKILQRILLVLALIGTCMVIGVGVLKPAISGDYDKFCLFWFEICILGSVSHPELFELNAVFSAMSGLELSMSKEHHRYVEVPAACIILIGLFALQRYGTHRVGFLFAPIVGIWLFSIGAIGIYNIFYWNPHVYRALSPYYGFQFLKKTQRGGWMALGGILLCITGSETMFAGLGHFSQLSIKIAFTCVVYPSLILAYMGQAAYFSRHHDVEHEYHFGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALSCFPRVKVVHTSSKIHGQVYIPEINWLLMLLCLAVTIGFRDTKLMGNAQGLAVISVMLVTTCLMSLVIVLCWHQNVFLAIGFVLLFGTIEALFFSACVIKFFEGAWVPIVLAFVFLTVMCVWHYGTLKKYEFDVQNKVSVNWLLSLGPSLGFVRVRGIGLVHTELVSGIPAIFSHFVTNLPAFHQILVFLCIKHVPVPHVRPEERFLVGRVGPRDFRLYRCIVRYGYHDVHKDDVEFEKDLVGSIAEFIRTGSGGFKFNSSNDDNIEKGDKMTVVGACSSHPILVSEHTEDDDVDSTEISEIKSPKVTQQPKKRVRFIVPESTKIDTGAMEELQELMGARDVGVAYIIGQSYMRAKPGSSMLKKLAINFGYEFLRKNSRSPSYVLSAPHASSLEVGMMYQV. 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03722 807 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 12 806 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca12g03722 807 Pfam K+ potassium transporter 26 177 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca12g03722 807 Pfam K+ potassium transporter 206 635 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca12g03722 807 NCBIfam potassium uptake protein 205 807 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03722 Seca-Chr12 95189930 95195789 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03722 1 807 Inorganic Solute Cotransporters AT1G70300 70.061 0.0 1149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03722 K03549 - gmx:100784861 1328.15