Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03711 ATGGGTCAATTCGAATTTGGAATCTATATTAAGGCTGTATTGGAGACCGTAGCTAAAATTACTCATGAAAAAGCAAAGAGAAATGATACACATGAGGGAAAGTGTGCTGAAAAGCAATGTGAAACCTTTGCGGTTGTTCTTCACTGTGTTGTTAAATGCTTTCTTTTTCATGTTTGTACCTGCTTACCTTTTTATGCAATTGCATGGCGGGACAATGTCTTTGTGATGTCAAACAAGAAATCCAAATATCTTGTGCTTCAAGTTGATTTGAGGCTAATATTTGACTTGGTGGTCGTCATAGTTTCTGCAGCCATTGGTGGAATTGTCCTTTCCTGTTTGGGGCAACTGGTTATCATGGGCTATCTCCTTGCAGGCTCACTTATTGGACCAGGGGGTTTGAAATTCATTAGTGAAATGGTACAGGTTGAGACTGTTGCACAGTTTGGGGTAGTGTTTCTTCTCTTTGCTTTGGGGCTGGAGTTTTCCTTGGCAAAGGTTTTCTATTAA 507 0.4004 MGQFEFGIYIKAVLETVAKITHEKAKRNDTHEGKCAEKQCETFAVVLHCVVKCFLFHVCTCLPFYAIAWRDNVFVMSNKKSKYLVLQVDLRLIFDLVVVIVSAAIGGIVLSCLGQLVIMGYLLAGSLIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLAKVFY. 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03711 168 Pfam Sodium/hydrogen exchanger family 97 166 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca12g03711 168 Gene3D - 89 167 IPR038770 -
Seca12g03711 168 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 11 166 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03711 Seca-Chr12 94878101 94887763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03711 11 166 Antiporters AT5G51710 64.968 1.30e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03711 K26735 - gmx:100810302 176.792