Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03709 ATGTTTCTCTATAACTTACGAATCGCTTGCTCTGCTTCGAAACAGGGTTGTGATGGGTCAGTACTACTTGATGACACTTCTTCCTTCAAAGGAGAGAAGACTGCACCTCCTAACAATCATTCTTTGAGAGGTTTTGAAGTCATTGATGCCATAAAGTCTAAGGTGGAGGAAGTATGCCCTAGTGTGGTGTCATGTGCTGATATTGTAGCAATTGCTGCTCGTGACTCTGTTGTCATTCTTGGAGGGCCATTTTGGAAGGTTAAACTTGGAAGAAGGGATTCAAAGACAGCGAACTTCCAAACTGCTATCAATGTGCTTCCATCTCCCTTTTCTGACCTTAGCAATCTTATCTCAAGATTTGAAGATCAAAGGCTCTCTACCAAGGACATGGTTGCCTTATCCGGAGCCCACACAATTGGGAAGGCAAAATGTTCTAGTTACAAAACACGTGTATACAATGATACCAACATTGACATGTCATTTGCAAAGGCAAGGCAGAGGAACTGTCCATGGACTAATGGCACAGCAAGAGACAACAATGTAGCAGTCCTAGACTTCAAAACTCCCAATCACTTTGACAACATGTACTACAAGAACCTCATCAACAAAAAGGGACTCCTTCAATCTGATCAGGTTCTCTTCAATGGAGGGTCTACAGATTCATTGGTTATAACTTACAGCAACAATCCCAAGGCATTTGAATATGACTTTGTTAATGCAATGATTAAGATGGGAGACATCAAACCTTTAACTGGGTCAAATGGGCAGATTAGGAAGCATTGCAGGTTTCCTAATTAG 798 0.416 MFLYNLRIACSASKQGCDGSVLLDDTSSFKGEKTAPPNNHSLRGFEVIDAIKSKVEEVCPSVVSCADIVAIAARDSVVILGGPFWKVKLGRRDSKTANFQTAINVLPSPFSDLSNLISRFEDQRLSTKDMVALSGAHTIGKAKCSSYKTRVYNDTNIDMSFAKARQRNCPWTNGTARDNNVAVLDFKTPNHFDNMYYKNLINKKGLLQSDQVLFNGGSTDSLVITYSNNPKAFEYDFVNAMIKMGDIKPLTGSNGQIRKHCRFPN. 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03709 265 Gene3D - 15 262 - -
Seca12g03709 265 Gene3D Peroxidase, domain 2 107 244 - -
Seca12g03709 265 Pfam Peroxidase 12 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g03709 265 ProSitePatterns Peroxidases proximal heme-ligand signature. 129 139 IPR019793 -
Seca12g03709 265 SUPERFAMILY Heme-dependent peroxidases 12 265 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca12g03709 265 ProSiteProfiles Plant heme peroxidase family profile. 15 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g03709 265 PANTHER PEROXIDASE 72-RELATED 15 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g03709 265 PRINTS Plant peroxidase signature 239 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g03709 265 PRINTS Plant peroxidase signature 199 216 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g03709 265 PRINTS Plant peroxidase signature 62 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g03709 265 PRINTS Plant peroxidase signature 43 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g03709 265 PRINTS Plant peroxidase signature 81 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g03709 265 PRINTS Plant peroxidase signature 128 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g03709 265 PRINTS Plant peroxidase signature 183 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g03709 265 FunFam Peroxidase 107 244 - -
Seca12g03709 265 CDD secretory_peroxidase 15 263 IPR033905 GO:0004601|GO:0042744
Seca12g03709 265 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g03709 265 PRINTS Haem peroxidase superfamily signature 129 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g03709 265 PRINTS Haem peroxidase superfamily signature 81 93 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g03709 265 PRINTS Haem peroxidase superfamily signature 63 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03709 Seca-Chr12 94850114 94852743 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03709 16 265 Peroxidase AT5G58400 65.339 6.93e-120 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03709 K00430 - gmx:100812478 383.259