LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca12g03709	ATGTTTCTCTATAACTTACGAATCGCTTGCTCTGCTTCGAAACAGGGTTGTGATGGGTCAGTACTACTTGATGACACTTCTTCCTTCAAAGGAGAGAAGACTGCACCTCCTAACAATCATTCTTTGAGAGGTTTTGAAGTCATTGATGCCATAAAGTCTAAGGTGGAGGAAGTATGCCCTAGTGTGGTGTCATGTGCTGATATTGTAGCAATTGCTGCTCGTGACTCTGTTGTCATTCTTGGAGGGCCATTTTGGAAGGTTAAACTTGGAAGAAGGGATTCAAAGACAGCGAACTTCCAAACTGCTATCAATGTGCTTCCATCTCCCTTTTCTGACCTTAGCAATCTTATCTCAAGATTTGAAGATCAAAGGCTCTCTACCAAGGACATGGTTGCCTTATCCGGAGCCCACACAATTGGGAAGGCAAAATGTTCTAGTTACAAAACACGTGTATACAATGATACCAACATTGACATGTCATTTGCAAAGGCAAGGCAGAGGAACTGTCCATGGACTAATGGCACAGCAAGAGACAACAATGTAGCAGTCCTAGACTTCAAAACTCCCAATCACTTTGACAACATGTACTACAAGAACCTCATCAACAAAAAGGGACTCCTTCAATCTGATCAGGTTCTCTTCAATGGAGGGTCTACAGATTCATTGGTTATAACTTACAGCAACAATCCCAAGGCATTTGAATATGACTTTGTTAATGCAATGATTAAGATGGGAGACATCAAACCTTTAACTGGGTCAAATGGGCAGATTAGGAAGCATTGCAGGTTTCCTAATTAG	798	0.416	MFLYNLRIACSASKQGCDGSVLLDDTSSFKGEKTAPPNNHSLRGFEVIDAIKSKVEEVCPSVVSCADIVAIAARDSVVILGGPFWKVKLGRRDSKTANFQTAINVLPSPFSDLSNLISRFEDQRLSTKDMVALSGAHTIGKAKCSSYKTRVYNDTNIDMSFAKARQRNCPWTNGTARDNNVAVLDFKTPNHFDNMYYKNLINKKGLLQSDQVLFNGGSTDSLVITYSNNPKAFEYDFVNAMIKMGDIKPLTGSNGQIRKHCRFPN.	266

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca12g03709	265	Gene3D	-	15	262	-	-
	Seca12g03709	265	Gene3D	Peroxidase, domain 2	107	244	-	-
	Seca12g03709	265	Pfam	Peroxidase	12	229	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Seca12g03709	265	ProSitePatterns	Peroxidases proximal heme-ligand signature.	129	139	IPR019793	-
	Seca12g03709	265	SUPERFAMILY	Heme-dependent peroxidases	12	265	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Seca12g03709	265	ProSiteProfiles	Plant heme peroxidase family profile.	15	265	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Seca12g03709	265	PANTHER	PEROXIDASE 72-RELATED	15	263	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Seca12g03709	265	PRINTS	Plant peroxidase signature	239	252	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Seca12g03709	265	PRINTS	Plant peroxidase signature	199	216	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Seca12g03709	265	PRINTS	Plant peroxidase signature	62	72	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca12g03709	Seca-Chr12	94850114	94852743	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca12g03709	16	265	Peroxidase	AT5G58400	65.339	6.93e-120	343

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca12g03709	K00430		-	gmx:100812478	383.259

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