Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03695 ATGGTGTATTGTCAGCCATCAAACATTCTTATTGATTCCAACTTCCAAGCAAAGCTTTCAGACTTTGGGTTGTCCAGGGTTATGGACCCGGGTCAATCCTATGTGAGCTCTGAAGTGAGAGGAACATTTGGTTATATTGATCCTGAATATCGGAGAAATCACCATGTAAATGCCTCAGGAGATGTCTACAGCTTTGGGATAGTGTTACTGCAACTACTATCAGGACAAAGGGTCCTTAACATTGATTTCCAAAGACCAATGTCCCTAAGTAAAATGGCCAGAGATTTTGCTAGAGGTGGTGAAATTTCAGGATTCGCTGACCCTAAACTCAAAGGGGCGTACTCTATAGAAGCATTTGAGATCATATTAAAGCTAGCTTTGTTATGCATAGGGCTCAAGAGGCAAAGGCCCTCTATAGAACAAGTGTTATATAGCCTAGTAAAGGCACTCGATATCTCACTATAA 465 0.4129 MVYCQPSNILIDSNFQAKLSDFGLSRVMDPGQSYVSSEVRGTFGYIDPEYRRNHHVNASGDVYSFGIVLLQLLSGQRVLNIDFQRPMSLSKMARDFARGGEISGFADPKLKGAYSIEAFEIILKLALLCIGLKRQRPSIEQVLYSLVKALDISL. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03695 154 SUPERFAMILY Protein kinase-like (PK-like) 6 144 IPR011009 -
Seca12g03695 154 Pfam Protein kinase domain 6 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g03695 154 ProSiteProfiles Protein kinase domain profile. 1 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g03695 154 Gene3D Transferase(Phosphotransferase) domain 1 4 152 - -
Seca12g03695 154 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 5 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03695 Seca-Chr12 94515248 94516270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03695 5 152 Receptor kinase-like Gene Family AT1G49100 38.667 1.91e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Seca12g03695 Pkinase 2.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03695 - - gmx:100790181 258.84