Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03682 ATGATTGGACGTGAGGGAGATAAGCTGGGAGGCTTGATAGTTTCGTCGTCGTCGCGTTTCGCCGGATTTTCAGCGGGGGTTGAGGAGTTGCATAAGGGGAGGAAGAGAGGACAAGAGCAGGAGGAGGTTGAGGAAGGGTTGAATTATGACTCTGATGAGGTAATTGAGATTGGAAAGTTGGAGGAGAATGGGGACAACAATTTAAACGTAAATAACAATAACAATGATAATGGGAATGGTGTCACTGATGGAAAGAAGAAGGGGAAGAATAAAGGGATGCCAACGAAGAATCTCATGGCTGAGAGGAGGCGTAGGAAGAAACTCAATCATAGGTTGTACATGTTTTGCTTTGTTGTATCGTAG 363 0.449 MIGREGDKLGGLIVSSSSRFAGFSAGVEELHKGRKRGQEQEEVEEGLNYDSDEVIEIGKLEENGDNNLNVNNNNNDNGNGVTDGKKKGKNKGMPTKNLMAERRRRKKLNHRLYMFCFVVS. 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03682 120 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 44 119 - -
Seca12g03682 120 MobiDBLite consensus disorder prediction 62 98 - -
Seca12g03682 120 MobiDBLite consensus disorder prediction 64 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03682 Seca-Chr12 94030695 94031466 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03682 46 120 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 52.000 1.48e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03682 - - csav:115700779 80.1073