Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03680 ATGCCAACGAAAAATCTCATGGCTGAGAGGAGGCGTAGGAAGAAACTCAATCATAGGTTGTACATGTTTCGCTCTGTTGTGTTGTTGTTCCATCAATGGAGGAAGCTAGGGCATGGAGCACATAGATGA 129 0.4496 MPTKNLMAERRRRKKLNHRLYMFRSVVLLFHQWRKLGHGAHR. 43
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03680 42 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 4 36 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03680 Seca-Chr12 94024246 94024374 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03680 1 27 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G12860 88.889 1.32e-11 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03680 - - ahf:112697118 50.447