Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03679 ATGGCTGTGAATTTGCTATTGCAAATTTGCGCCCATTGTTGGCTTTTGCCTACAGACAGATTTTCGGTGGGGGTGGAGGAGTTGGAGAAGAGGAGGAAGAGAGGACAAGAGGAGGAGGAGGTTGAGGAAGGGTTGAATTATGACTGTGATGAGGTAATTGAGATTGGAAAGTTGGAGGAGAATGGGGACAACAATTTCAACGCAAATAACAATAACAATGATAATGGGAATGGTCTCACTGATGGAAGGAATAAGGGGAAGAAGAAAGGGATGCCAATGAAGAATCTCATGGCTGAGAGGAGGCGTAGGAAGAAACTCAATCATAGGTTATACATGTTTCGCTCTGTTGTGTCGTAG 357 0.4426 MAVNLLLQICAHCWLLPTDRFSVGVEELEKRRKRGQEEEEVEEGLNYDCDEVIEIGKLEENGDNNFNANNNNNDNGNGLTDGRNKGKKKGMPMKNLMAERRRRKKLNHRLYMFRSVVS. 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03679 118 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 62 117 - -
Seca12g03679 118 MobiDBLite consensus disorder prediction 62 80 - -
Seca12g03679 118 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 81 117 IPR036638 GO:0046983
Seca12g03679 118 MobiDBLite consensus disorder prediction 81 96 - -
Seca12g03679 118 MobiDBLite consensus disorder prediction 60 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03679 Seca-Chr12 94013895 94014574 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03679 44 117 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 55.405 2.33e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03679 - - nnu:104592766 73.559