Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03678 ATGAACCAACGAGCAAAGAACAACGAGATCACGATCAACCAAATCACCTCGCAGGTGAAGGCGCTGGATGCCGCTGTAAAGCTCAGAGGATGTGAGGATGATAAGCTAGGAGGATTTATAGTTTCGCCGTTGTCACGTTCCAACAGATTTTCGGTGGGGGTGGTGGAGTTGGAGAAGAGGAGGAAGAGAGGAGAAGAGGAGGAGGTTGGGGAAGGGTTGAATTTTGACTCTGGTGAGGTAATTGAGATTGGAAAGTTGGAGGAGAATAGGGGAAACAATTTCAACGCAAATAACAATAACAATGATAATGGGAATGGTGTCACCAGTGGAAAGAAGAAAGTGATGCCAACGAAAAATCTCATGGCTGAAAGGAGGCATAGGAAGAAACTCAATCATAGGTTGTACATGTTTCGCTCTGTTGTGTTGTTGTTCCATCAATGGAGGAAGCTAGGGCACAGAGCACATAGATGA 471 0.4544 MNQRAKNNEITINQITSQVKALDAAVKLRGCEDDKLGGFIVSPLSRSNRFSVGVVELEKRRKRGEEEEVGEGLNFDSGEVIEIGKLEENRGNNFNANNNNNDNGNGVTSGKKKVMPTKNLMAERRHRKKLNHRLYMFRSVVLLFHQWRKLGHRAHR. 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03678 156 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 71 141 - -
Seca12g03678 156 MobiDBLite consensus disorder prediction 90 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03678 Seca-Chr12 94013073 94013812 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03678 64 141 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 49.383 3.25e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03678 - - pcin:129305251 77.4109