Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03677 ATGCTCCATAAGCATAAGCCTCATTGTTTGTTTTTTGGTTCCCAAACCAGTGGAAGTTACCCCTCATGCATGACAATTGCTCTTAATTTTCCTGTCAACTATCGCTGGCCTGGTTCTGAGGTCGTTGCTAGTGGGAGCGTGGGGTTTTCTGAGCTTGACTTCTTCTGTGGTGAAAAAACCTCTGAGCTTTACAGCGGCATCCAGCGCCTTCACCTGCGAGGATGTGAGGGTGATAAGCTCGGAGCCTTGATAGTTTTGCCGTCGTCGCGTATCGCCGGATTTTCGGCTGGGGTGGAGGAGTTGGAGAAGAGGAGGAAGAGAGGACAAGTGGAGGAGGAGGAGGTTGAGGAAGGGTTGAATTATGACTGTGATGAGGTAATTGAGATTGGAAAGTTGGAGGAGAATGGGGACAACAATTTCAACGCAAATAACAATAACAATGATAATGGGAATGGTGTCACTGATGGAAAAAAGAAGGCGAAGAAGAAAGGGACGCCAACGAAGAATCACATGGCTGATAGGAGGCATAGGAAGAAACTCAATCATAGGTTGTACATGTTTCGCTCTATTGTATCGTAG 579 0.468 MLHKHKPHCLFFGSQTSGSYPSCMTIALNFPVNYRWPGSEVVASGSVGFSELDFFCGEKTSELYSGIQRLHLRGCEGDKLGALIVLPSSRIAGFSAGVEELEKRRKRGQVEEEEVEEGLNYDCDEVIEIGKLEENGDNNFNANNNNNDNGNGVTDGKKKAKKKGTPTKNHMADRRHRKKLNHRLYMFRSIVS. 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03677 192 MobiDBLite consensus disorder prediction 135 174 - -
Seca12g03677 192 Coils Coil 98 118 - -
Seca12g03677 192 MobiDBLite consensus disorder prediction 136 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03677 Seca-Chr12 94007911 94013339 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03677 108 191 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 44.706 2.55e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03677 - K19312 pvu:PHAVU_004G070200g 65.855