Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03674 ATGCCAACGAAAAATCTCATGGCTGAGAGGAAGCGTAGGAAGAAACTCAATCATAGGTTGTACATGTTTCGCTCTGTTGTGTTGTTGTTCCATCAATGGAGGAATCTAGGGCACAGAGCACATAGATGA 129 0.4341 MPTKNLMAERKRRKKLNHRLYMFRSVVLLFHQWRNLGHRAHR. 43
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03674 42 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 4 32 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03674 Seca-Chr12 93984759 93984887 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03674 1 27 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 85.185 5.57e-11 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03674 - - ahf:112697118 49.2914