Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03673 ATGCTTTGGAGAAGCTATCAAGGATGTGAGGATGATAAGCTAGGAGGCTTGATAGTTTCGCCGTCGTCGCGTTTCGCCGGATTATCGGAGGGGGTGGAGGAGTTGGAGAAGAGGAGGAAGAGAGGACAAGAGGAGGAGGAGTTTGAGGAATGGTTGAATTATGACTCTGATGAGGTAATTGAGATTGGAAAGTTGGAGGAGAATGGGGACAACAATTTCAACGCAAATAACAATAACAATGATAATGGGAATGGTGTCACTGATGGAAAGAAGAAGGGGAAGAAGAAAGGGATGCCAACGAAGAATCTCATGGCTGAGAGGAGGCGTAGGAAGAAACTCAATCATAGGTTGTACATGTTTCACTCTGTTGTATCGTAG 378 0.4524 MLWRSYQGCEDDKLGGLIVSPSSRFAGLSEGVEELEKRRKRGQEEEEFEEWLNYDSDEVIEIGKLEENGDNNFNANNNNNDNGNGVTDGKKKGKKKGMPTKNLMAERRRRKKLNHRLYMFHSVVS. 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03673 125 MobiDBLite consensus disorder prediction 67 108 - -
Seca12g03673 125 MobiDBLite consensus disorder prediction 87 104 - -
Seca12g03673 125 MobiDBLite consensus disorder prediction 69 86 - -
Seca12g03673 125 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 49 124 - -
Seca12g03673 125 Coils Coil 25 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03673 Seca-Chr12 93975193 93976202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03673 52 124 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 54.795 4.65e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03673 - - csav:115700779 80.8777