Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03666 ATGGAGAAGTACACATTAATAGCTATTATTGGAATCAAGGATCCAGTGAGACCTGGAGTAAAAGAAGCTGTTAAGACTTGTTTAGAAGCTGGGATTACCGTTAGAATGGTAACTGGTGACAACATAAATACTGCTAAAGCGATTGCTAGAGAATGTGGCATCTTGACAGATGGATTGGCGATAGAGGGACCAGATTTCCAGAAAAAGACCCAGCGAGAAATGAAAGAGATAATACCAAAAATACAGGCAATGGCTCGATCCTTGCCTCTTGACAAGCACACCTTAGTGACCCATTTGAGGAATGACTTTAATGAAGTTGTGGCAGTAACTGGTGATGGGACCAATGATGCTCCAGCGTTGCATGAGGCTGATATTGGACTTGCTATGGGTATTGCTGGGACTGAGGTACATAATGGCATTGGCCCTCTTGTTGATATTAATAAAAAAGTGTATCTCCTACCTCCAAGCATGAAGGATTTGCAGATTTTCAGGTTTCTTAAAAATGGAGGTCTGTTGCTGGCCAGAGTAGCAGTGACATTCTGTGTGACATTGGCAGCCTCATTAGCAGCAAGGTTAGGCTCCAGGTTCAGTGCTTCACTGCTTAATTTCATGTTTCTTTTTCTTTCATCAACAATTATTATTTATTAA 648 0.412 MEKYTLIAIIGIKDPVRPGVKEAVKTCLEAGITVRMVTGDNINTAKAIARECGILTDGLAIEGPDFQKKTQREMKEIIPKIQAMARSLPLDKHTLVTHLRNDFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVHNGIGPLVDINKKVYLLPPSMKDLQIFRFLKNGGLLLARVAVTFCVTLAASLAARLGSRFSASLLNFMFLFLSSTIIIY. 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03666 215 Pfam haloacid dehalogenase-like hydrolase 6 124 - -
Seca12g03666 215 PANTHER CATION TRANSPORTING ATPASE 3 137 - -
Seca12g03666 215 FunFam copper-transporting ATPase 1 isoform X2 10 55 - -
Seca12g03666 215 SUPERFAMILY HAD-like 5 136 IPR036412 -
Seca12g03666 215 Gene3D - 16 136 IPR023214 -
Seca12g03666 215 Gene3D - 3 15 IPR023299 GO:0000166
Seca12g03666 215 PRINTS P-type cation-transporting ATPase superfamily signature 30 40 - -
Seca12g03666 215 PRINTS P-type cation-transporting ATPase superfamily signature 110 129 - -
Seca12g03666 215 PRINTS P-type cation-transporting ATPase superfamily signature 8 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03666 Seca-Chr12 93627495 93628641 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03666 4 144 Primary Pumps ATPases AT2G22950 75.352 4.88e-67 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03666 K01537 - gmx:100801260 242.662