Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03645 ATGGGCGACGAAAATTTTTCAAGAAGAAGAAAGGAAGTTGTTGGAGAGGAATCTCCATTGCTACCCAAGAATGGAAATGGGGCATCCTTTACTGGGTCTGTCTTCAATTTGTCAACCACCATCATTGGTGCTGGGATCATGGCCTTACCTGCAGCCATGAAAGTTCTTGGTCTGGTTATGGGTATTGCTGCCATCATCTTCCTTGCTTTGCTCACAGAGACCTCTTTGGACATTCTTATGAGATTTAGCAGAGTTGGCAAGGCTGGGACCTACGGGGAGGTCATGGGGCATGCTTTTGGAAGTCTTGGACGATTCGTGCTTCAGATATCTGTTCTTATCAACAACTTTGGGATACTTGTTGTCTACATGATCATAATTGGTGATGTGCTGTCTGGAACATCTTCAAGTGGAATTCATCATTTGGGTGTACTGGAAGGATGGTTTGGTGAACACTGGTGGACTGGGCGTACTTTTGTTCTTCTTGTGGCAACCCTTTTGGTATTTGCTCCATTGGGATTCTTTAAGAGGATAGATTCATTAAGATATACTTCTGCTTTAGCAGTGGCTCTGGCAATGGTGTTTCTTGTCATAACTGCAGGAATCACATTTACTAAACTGTTTGATGGCAGTATTGCAAGTCCCAGGTTACTTCCTAATATTACTGATATTACATCCATATGGAATCTCTTTACAGCAGTTCCGGTTCTTGTCACAGCATTTGTTTGTCATTATAATGTGCATACAATAGAGAATGAGCTAGGAGACTCTTCCTCAATACAACCAGTTGTATGTGCATCACTGGTTCTATGTTCTGTTATCTATATTCTTACAGCCTTGTTTGGATTTCTCCTATTTGGTGAGTCCACCCTTGATGATGTGCTTGCCAACTTTGATACTGATCTTGGCATCCCTTATAGCAGTGTGCTCAATGACATTGTTCGTATCAGCTATGCCTTCCACCTCATGCTTGTTTTTCCAGTTATCTTCTTTTCGCTGCGCTTCAATTTGGATGATCTTATCTTTCCTCCAGCCAGGTCATTGAATTTAGATAAGTGTAGGTTTGTCTTCATCACCATTGGACTCATTTCTCTGCTCTATGTGGCTGCAAATTTTATTCCTAGCATCTGGATTGTTTTCCAATTCACTGGAGCAACTGCCACTGTTTGCCTTGGCTTTGTTTTCCCTGCTGCAATTGCTCTAAGGGATCCCTATGGCATTGCAATGAAGAAAGACAAGATTTTATCCATTATCATGATTTTCTTGGCTGTCTTCTCAAACATTATCGCTATATACAGTAATTCAGATTCCTTGTTGAAAAAACACATTGATCCTCACCAATGA 1341 0.4131 MGDENFSRRRKEVVGEESPLLPKNGNGASFTGSVFNLSTTIIGAGIMALPAAMKVLGLVMGIAAIIFLALLTETSLDILMRFSRVGKAGTYGEVMGHAFGSLGRFVLQISVLINNFGILVVYMIIIGDVLSGTSSSGIHHLGVLEGWFGEHWWTGRTFVLLVATLLVFAPLGFFKRIDSLRYTSALAVALAMVFLVITAGITFTKLFDGSIASPRLLPNITDITSIWNLFTAVPVLVTAFVCHYNVHTIENELGDSSSIQPVVCASLVLCSVIYILTALFGFLLFGESTLDDVLANFDTDLGIPYSSVLNDIVRISYAFHLMLVFPVIFFSLRFNLDDLIFPPARSLNLDKCRFVFITIGLISLLYVAANFIPSIWIVFQFTGATATVCLGFVFPAAIALRDPYGIAMKKDKILSIIMIFLAVFSNIIAIYSNSDSLLKKHIDPHQ. 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03645 446 Pfam Transmembrane amino acid transporter protein 28 432 IPR013057 -
Seca12g03645 446 MobiDBLite consensus disorder prediction 1 20 - -
Seca12g03645 446 MobiDBLite consensus disorder prediction 1 17 - -
Seca12g03645 446 PANTHER AMINO ACID TRANSPORTER 25 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03645 Seca-Chr12 93135754 93143403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03645 8 441 Amino Acid or Auxin Permease AAAP Family AT3G30390 62.022 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03645 K14207 - gmx:100778699 687.182