Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03533 ATGGCCTTCCTCTTGATGCTGCTGCTCCTCTCCTTTGTGCTGGGATCAGTGTATAGCCCATTAAGATATTTTGGGCTTGACAAGCCCGGCCTGCAATTGGGTGTGGTTGGTCTTGGTGGGCTTGGTCATATGGCTGTGAAGTTTGCTAAAGCGTTTGGGGCTAAGGTAACAGTAATTAGCACATCTCCTAACAAAAAGAAAGAAGCCATTGAACATCTTGGAGCTGACTCATTTGTGGTTAGCAATGAGCAAGATCAAATGCAGGCTGTAATGGGCACCTTAGATGGTATCATTGACACAGTTTCTGCCGTCCATCCCCTGTTTCCTTTGATTGCTCTGTTGAAGTCTCATGGGAAACTTGTCATGGTGGGTGCACCAGAGAAGCCTCTGGAGCTACCAGTATTCCCTTTACTTTTGGGGAGAAAGATAATAGCTGGAAGTTGCATCGGAGGAATAAAGGAGACACAAGAAAAGATTGATTTTGCTGCTAAACATAATGTGAAACCTGACATTGAGGTTATTCCTATAGATTATGTGAACACCGCAATGGAGCGCCTCCTCAAAGCAGATGTAAAATATCGATTTGTTATTGACATTGGGAACACGCTAAAGCCAAGCTCTTAA 624 0.4423 MAFLLMLLLLSFVLGSVYSPLRYFGLDKPGLQLGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEAIEHLGADSFVVSNEQDQMQAVMGTLDGIIDTVSAVHPLFPLIALLKSHGKLVMVGAPEKPLELPVFPLLLGRKIIAGSCIGGIKETQEKIDFAAKHNVKPDIEVIPIDYVNTAMERLLKADVKYRFVIDIGNTLKPSS. 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03533 207 Pfam Zinc-binding dehydrogenase 40 163 IPR013149 -
Seca12g03533 207 Gene3D - 170 199 - -
Seca12g03533 207 Gene3D - 17 169 - -
Seca12g03533 207 FunFam Cinnamyl alcohol dehydrogenase 15 169 - -
Seca12g03533 207 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 168 IPR036291 -
Seca12g03533 207 PANTHER ALDEHYDE REDUCTASE 17 202 IPR047109 GO:0016616
Seca12g03533 207 FunFam Putative cinnamyl alcohol dehydrogenase 6 170 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03533 Seca-Chr12 81198953 81205383 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03533 16 206 Monolignol Biosynthesis Gene Families AT4G37990 70.157 2.36e-78 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03533 K23232 - gmx:100816901 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g03533 12 81198953 81205383 Seca12g03533 12 81198953 81205383 ECH