Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03502 ATGACGGAACAAAGGAACCGGTGGAGCTGGGACGTTACCGGTTTCGAGCCATGGAAATCGTCACCGCCGTCGCCGTCGCCGTCGGCTTCGGCGGCTGTTGAGCACGACGATCGGAAACCTAGCGCGCCGTTGGTGAGGAGGTACTCCATTTCGGCCTCATCGGTTCTTCCTCAGCACAAGCACTCCATGGCCTTTAAGCTTCAGCGGTTGAAGGACAAAGTCAAGCTTGCTAGGGAAGACTATTTGCAGTTAAGACAAGAGGCAAGTGAACTTCAAGAATATTCAAATGCAAAACTTGATCGAGTTACACGATATCTTGGTGTTCTTGCTGAGAAAACCCGCAAGCTAGATCAAGTTGCCATTGAAACTGAAGCAAGAATATCTCCAGTGATAAATGAGAAAAAAAAATTGTTCAATGATTTATTGACATCTAAAGGAAACATACGAGTTTTTTGCCGGACAAGGCCTTTATTTGAAGATGAAGGTCCTTCAGTTGTTGAATTTCCAGATGACTATACCATTCGTGTAAATACTAATGATGAATCCTTGTCTAACTCCAAGAAAGATTTTGAATTTGACCGGGTTTATGGACCTCATGTTGGACAAGCTGACTTATTCAGTGATGTTCAACCACTGGTACAATCAGCCTTGGATGGATATAATGTTTCCATTTTTGCATATGGGCAAACCCTTTCCGGAAAGACACACACTATGGAAGGATCGAGCTATGATCGGGGTTTATATGCTCGTTGTTTTGAGGAGTTGTTTGATCTAGCCAACTTGGATACAACCTCGACTTCTCAATATAAATTCTGTGTTACAGTTTGTGAGCTCTATAATGAACAGACAAGGGATCTACTTTTGGAGTCAGGGAAAAGCATGCCTACAATCTGCTTGGGGTCATCTGAGTGTTTGGTAGAACTGGTGCAGGAAAAAGTTGATAATCCTCTGGATTTTTCTACAGTTTTAAAAGCTGCATTTCAGAGTCGAGGAAATGATTTATTGAAGATTAATGTATCTCATTTGTATGGTCTAAATTCTCTGCCCACATCATGCATGGTCATATTGTATATATTTTATAACAATTTGATCACCGGTGAAAACTCGTATAGCAAACTCTATTTGATTGACTTGGCTGGAAGTGAAGGTTCAATTACAGAAGAGGATAGTGGTGAGCGTGTCACAGATTTGCTGCATGTTATGAAGTCACTTTCAGCGTTGGGAGATGTTTTGTCTTCTTTAACATCAAAGAATGATGTTATTCCTTATGAAAATTCAGTGCTAACGAAACTACTTGCAGATTCACTTGGTGGGAGTTCAAAGACTCTGATTATTGTGAATATCTGTCCAAGTGTCACAAATTTATCTGAGACATTGTCGTCTCTCAATTTCTCTGCTAGAGCTCGAAATTCTGTGTTAAGCCTTGGAAACCGAGATACAATTAAGAAGTGGAGAGATGTTGCGAATGATGCACGTAAGGAGTTGTATGAGAAGGAAAAAGATATCCATGATCTAAAGCAAGAGGGTCTGGGACTCAAGCAAGCACTTAAAGATGCAAATGATCAGTGTGTTCTACTCTTCAATGAAGTGCAGAAGGCATGGAAAGTTTCTTCTGCATTGCAGACCGATTTGAAGTCGGAACATATTTTGCTTTCAGATAAGTATAATATTGAGAAAGAACAAAATACTCAGCTTAGAAATCAAGTTGCTCAACTGTTACAGTTAGAACAAGATCAAAAGTTGCAGATACAACAGCAAGATTCAACCATCGAAAGTTTGCAGGCTAAAATTAGAACCCTTGAAACTCAACTTAATGAAGCTCTTAGATCCAGTGAAAGAAGGTCAACGTTTGTCTTAGAGCCAGAGTCTGCGGCTCTATCCAATTCCAGAACAACTGCAGATGGCATGGACTCTTCTGCAGTAACAAAAAAGTTAGAAGAGGAACTCAAGAAACGTGATGCTCTGATTGAGAGGTTGCATGAAGAAAATGAGAAATTGTTTGATAGATTAACTGAGAAAGCATCTGTGGCTTGCTCGCCTAAGTTGGCACTTTATTTTCAGCTATCAAGTCCATTATCTCGTGAATCAGTTAATGTTCAGCCTCAAGATACGGGAAGAAATGGGACCAGCAACAGTACAACAGCTCGTTCCATGGATGTTCTTCCTTCACCTTTGGCCACTGATAAGAATGACGGCACAGTTGCTTTAGTTAAATCTGGCTCTGAAATAGTTAAGACTACCCCTGCAGGTGAATATCTTACTGCTGCCCTGAATGACTTTGATCCAGATCAATATGAAGGGCATGCTGCCATTTCTGATGGTGCAAACAAGCTTTTGATGCTGGTTCTGGCCGCTGTCATCAAAGCTGGTGCCTCTAGAGAACATGAGATACTTGCTGAAATTAGGGATGCTGTTTTCTCTTTTATTAGGAAAATGGAACCAAAGCGAGTAATGGACACCATGCTTGTTTCCCGTGTTAGAATTCTGTATATAAGATCTTTACTTGCAAGATCCCCAGAGTTGCAATCAATTAAGGTCTTGCCAGTTGAATGCTTTCTTGAGAAGGCTAATACTGGGCGCAGTAGAAGTTCCAGCCGAGGGAACAGTCCTGGAAGGTCTCCTGTGCAATATGTTGATGAGCAGATCCAGGGATTTAAAGTGAATCTTAAGCCAGAAAGGAAGTCCAAATTTTCATCTGTTGTGTTGAAGATACGTGGGATTGATCAGGACATCTGGAGACAGCAAGTCACTGGTGGAAAGCTTAGAGAAATTACTGAGGAAGCCAAAAGTTTTGCAATTGGAAACAAGGCTCTTGCTGCACTCTTTGTACATACTCCAGCTGGTGAGTTGCAGCGCCAAATTAGATCTTGGCTTGCAGAGAACTTTGACTTTCTATCTGTTTCTGGGAATGATGCATCGGGGGGGTCAACTGGTCAGTTAGAACTTCTTTCAACTGCAATTATGGATGGTTGGATGGCTGGACTTGGCGCTGCTCTGCCTCCTCACACTGATGCCCTTGGCCAGCTATTGTTTGAATATTCCAAACGTGTCTATACTTCTCAGCTACAGCACTTGAAGGACATTGCTGGTACCTTGGCAACTGAAGAGGCTGAAGATGCAGCGCAAGTAGCGAAGCTACGTTCAGCTCTAGAATCTGTTGATCATAAAAGAAGAAAGATTCTGCAACAAATGAGAAGTGATGTAGCTTTGCTGACATTGGAAAATAGTGGTTCACCTATTTCAAATCCTTCTACTGCTGCTGAAGATGCACGATTAGCATCTCTCATTTCACTTGATGGCATATTAAAGCAAATCAAGGATATAACAAGACTTTCATCTGTGAACATCTTGAGCAAAAGTAAGAAAAGAGCAATGCTTGCTTCTCTTAATGAACTAACAGAACAGATGCCTTCACTTCTTGAAATTGATCATCCATGTGCTCAGAGCCACATTGCAGATGCTCGCCAAATGGTTGAGTCAATTCCTGAAGAAGATGACCGCATTCAAGATCTATCTCATGGTCGCAAGCCATCAACAGATCTGGGTTCTGGATCTGAAACTGTTGTGGCACAGTGGAACGTACTCCAATTTAATACGGGCGCTACCTCCCCATTTATAATAAAATGCGGAGCGAACTCTAATTCAGAACTAGTCATTAAAGCTGACGCTCGAGTTCAGGAGCCTAAAGGTGGTGAAATTGTGAGGGTTGCCCCAAGACCCTCCGTTTTGGAAAATATAAGCTTGGAGGAAATGAAACAAGTATTTGCCGAACTACCCGAGGCTCTAAGTTTGCTTGCCCTAGCAAGGACGGCAGATGGTACTCGGGCACGGTATTCTAGATTATATAGGACCTTGGCTACGAAGGTTCCATCCCTTAGAGATTTAGTCAATGAGCTTGAAAAAGGAGGTGTACTCAAAGATGTGAGAACATGA 3933 0.4193 MTEQRNRWSWDVTGFEPWKSSPPSPSPSASAAVEHDDRKPSAPLVRRYSISASSVLPQHKHSMAFKLQRLKDKVKLAREDYLQLRQEASELQEYSNAKLDRVTRYLGVLAEKTRKLDQVAIETEARISPVINEKKKLFNDLLTSKGNIRVFCRTRPLFEDEGPSVVEFPDDYTIRVNTNDESLSNSKKDFEFDRVYGPHVGQADLFSDVQPLVQSALDGYNVSIFAYGQTLSGKTHTMEGSSYDRGLYARCFEELFDLANLDTTSTSQYKFCVTVCELYNEQTRDLLLESGKSMPTICLGSSECLVELVQEKVDNPLDFSTVLKAAFQSRGNDLLKINVSHLYGLNSLPTSCMVILYIFYNNLITGENSYSKLYLIDLAGSEGSITEEDSGERVTDLLHVMKSLSALGDVLSSLTSKNDVIPYENSVLTKLLADSLGGSSKTLIIVNICPSVTNLSETLSSLNFSARARNSVLSLGNRDTIKKWRDVANDARKELYEKEKDIHDLKQEGLGLKQALKDANDQCVLLFNEVQKAWKVSSALQTDLKSEHILLSDKYNIEKEQNTQLRNQVAQLLQLEQDQKLQIQQQDSTIESLQAKIRTLETQLNEALRSSERRSTFVLEPESAALSNSRTTADGMDSSAVTKKLEEELKKRDALIERLHEENEKLFDRLTEKASVACSPKLALYFQLSSPLSRESVNVQPQDTGRNGTSNSTTARSMDVLPSPLATDKNDGTVALVKSGSEIVKTTPAGEYLTAALNDFDPDQYEGHAAISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFSFIRKMEPKRVMDTMLVSRVRILYIRSLLARSPELQSIKVLPVECFLEKANTGRSRSSSRGNSPGRSPVQYVDEQIQGFKVNLKPERKSKFSSVVLKIRGIDQDIWRQQVTGGKLREITEEAKSFAIGNKALAALFVHTPAGELQRQIRSWLAENFDFLSVSGNDASGGSTGQLELLSTAIMDGWMAGLGAALPPHTDALGQLLFEYSKRVYTSQLQHLKDIAGTLATEEAEDAAQVAKLRSALESVDHKRRKILQQMRSDVALLTLENSGSPISNPSTAAEDARLASLISLDGILKQIKDITRLSSVNILSKSKKRAMLASLNELTEQMPSLLEIDHPCAQSHIADARQMVESIPEEDDRIQDLSHGRKPSTDLGSGSETVVAQWNVLQFNTGATSPFIIKCGANSNSELVIKADARVQEPKGGEIVRVAPRPSVLENISLEEMKQVFAELPEALSLLALARTADGTRARYSRLYRTLATKVPSLRDLVNELEKGGVLKDVRT. 1311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03502 1310 ProSiteProfiles Kinesin motor domain profile. 147 471 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g03502 1310 Coils Coil 583 610 - -
Seca12g03502 1310 MobiDBLite consensus disorder prediction 695 720 - -
Seca12g03502 1310 Gene3D Kinesin motor domain 91 471 IPR036961 -
Seca12g03502 1310 PRINTS Kinesin heavy chain signature 219 240 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g03502 1310 PRINTS Kinesin heavy chain signature 421 442 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g03502 1310 PRINTS Kinesin heavy chain signature 372 390 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g03502 1310 Coils Coil 642 665 - -
Seca12g03502 1310 Coils Coil 67 94 - -
Seca12g03502 1310 PANTHER KINESIN-LIKE PROTEIN KLP-3 557 1255 IPR027640 GO:0003777|GO:0007018
Seca12g03502 1310 SMART kinesin_4 145 479 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g03502 1310 MobiDBLite consensus disorder prediction 695 724 - -
Seca12g03502 1310 Coils Coil 488 522 - -
Seca12g03502 1310 FunFam kinesin-like protein KIN-14B isoform X1 94 472 - -
Seca12g03502 1310 Pfam Kinesin motor domain 153 470 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g03502 1310 Coils Coil 555 578 - -
Seca12g03502 1310 MobiDBLite consensus disorder prediction 1162 1184 - -
Seca12g03502 1310 ProSitePatterns Kinesin motor domain signature. 371 382 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca12g03502 1310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 470 IPR027417 -
Seca12g03502 1310 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03502 Seca-Chr12 79570504 79610551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03502 134 472 Calmodulin-binding Proteins AT5G65930 35.838 7.98e-48 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03502 - - gmx:100796816 2196.39