Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03498 ATGGAGACAGATAACGGAACCCGAGGCAGCAGATCCGAATCCGGAACCGATCACCTCCTTCGTCCATGCGCCGCCGCGCTTTCGCGCCATGACTTCACTGCTTGCCGCGAGCTCGCCTATCGGGTTCCAAGATCCGACCCGAATATCACCTCCCAAGTGGACCAAATCCTCGCGATAACCGATGTTCTCAGCGCCGCTTCTCGCCGCCTCGGCAACAGCCACAACCTCGACTGGTACTCCATCCTTCAGCTCCGCCCCGCCGATGCCGAAAACCGCGACCTCGCGAGGCAGCAGTTCAAGACACTCGTCCGCCTCCTTGACCCAAACAAGAATAAGTTTCCACTCGCTGACGATGCCCTCATGCGCGTCCGTGAGGCATGGTCCATTCTCTCTGACCCAGTTCGGCGAGGCCAGTTTGACAGTGAGATTCGCGGAGATGGTACCGGCCCAAGCAATGGCCCAAGCAACGTTGAAACTACGGCGTCGTTTTGGACAATGTGTCCTTACTGTTGGTTTCTCCATGAGTATGAGACTAAGTATGAGGATTGCACCTTAAGATGTGGAAATTGCCGGAGAACATTTCATGGTGTGGCGGTGAAGCCGCCGGCGCCTGAGACTTTGGTGGAGGGGAAGGAGCAGTATTATTGCTACCACTTGAGTTTGCCCTTGAGGTACCCTGTGGATGAAAGATGCGGTTTTGGTGACAATAGCGAGAGAATGGATGTTCATGGTAATGGGAAAAGGAGACTGAGGATTAAAACTGTGGCTAATAGAGTCAGAATGAAAGGGTTTGTTGAACCTGACAGTGACTAG 813 0.54 METDNGTRGSRSESGTDHLLRPCAAALSRHDFTACRELAYRVPRSDPNITSQVDQILAITDVLSAASRRLGNSHNLDWYSILQLRPADAENRDLARQQFKTLVRLLDPNKNKFPLADDALMRVREAWSILSDPVRRGQFDSEIRGDGTGPSNGPSNVETTASFWTMCPYCWFLHEYETKYEDCTLRCGNCRRTFHGVAVKPPAPETLVEGKEQYYCYHLSLPLRYPVDERCGFGDNSERMDVHGNGKRRLRIKTVANRVRMKGFVEPDSD. 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03498 270 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 14 229 - -
Seca12g03498 270 ProSiteProfiles dnaJ domain profile. 77 143 IPR001623 -
Seca12g03498 270 Pfam DnaJ domain 77 140 IPR001623 -
Seca12g03498 270 CDD DnaJ 77 132 IPR001623 -
Seca12g03498 270 SUPERFAMILY Chaperone J-domain 73 144 IPR036869 -
Seca12g03498 270 SMART dnaj_3 76 135 IPR001623 -
Seca12g03498 270 Gene3D DnaJ domain 73 144 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03498 Seca-Chr12 79458910 79459722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03498 10 225 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.802 1.37e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03498 - - gmx:102659715 328.561