Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03489 ATGGAAGAGAGCAATGACCCTGCAAACTCAAGCCTTCTGTGTTTGGAAAGCAGCAGCACATGCTTTGATGATTTGGAATGTGATGCTGCAGATGGGTCTCCTTTCTGGGACCACAAAAACCTTAACTTTATCAATCAATGTGCGAGTAAGGACAACCATGGATCGGAACCCTTTGTGGGTTTTCTCGTACAGAGCGATGAAACTGTTCGGTTTTTGTTTGAGAGGGAGAGAGAGCATTTGCCCCGGGATGATTACCTGAAGAGGCTGCGTAGTGGGGACTTGGACTTGAGTGTTAGGAGGGAGGCTCTTGATTGGATTTGGAAGGCTCATGCATATCATGGTTTTGGACCCTATAGCTTTTGTCTGTCTGTGAACTACTTGGATCGGTTCCTATCATCAACATACGAATTGCCTGTGAGATCTAATACTAAACCACACTAG 441 0.4558 MEESNDPANSSLLCLESSSTCFDDLECDAADGSPFWDHKNLNFINQCASKDNHGSEPFVGFLVQSDETVRFLFEREREHLPRDDYLKRLRSGDLDLSVRREALDWIWKAHAYHGFGPYSFCLSVNYLDRFLSSTYELPVRSNTKPH. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03489 146 SUPERFAMILY Cyclin-like 62 135 IPR036915 -
Seca12g03489 146 Gene3D - 72 81 - -
Seca12g03489 146 Gene3D - 82 134 - -
Seca12g03489 146 Pfam Cyclin, N-terminal domain 69 133 IPR006671 -
Seca12g03489 146 ProSitePatterns Cyclins signature. 99 130 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03489 Seca-Chr12 78625947 78627339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03489 55 138 Core Cell Cycle Gene Families AT5G65420 59.302 2.98e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03489 K18810 - gmx:100800570 193.741