Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03454 ATGAATCCATCTTGTCGCTTCTCTTTAACCAAACACACAACCTCTCCTCTTTTCCTTCGAAATTCTCATATCTGCCTCTCCAATATTACTTCCCCTTTCTTTCTCAGAGACTGTCTCCATGTTAAGCCTATTATCCCTCTTTCACCAAACATAACAAAGGCTTCTAGTTCTCTTGGCATTCTCAGGTTTAGAAACTGCAAACTTTCACACCCTTTTGCTACCTTGTCCTCTTTTGCAGAAGCTGAAGGGGAAGAGGGGCAGAAAGAGGAAATTCAGCTAAATGGGCATCACCAGCACACTACACCAAAAGCAGGAGAGAACGATGACTTGTCTGGAATGGCAAAAGCCTTCAACATATCATCACGCACTGCTTCTGCTATATCAATATGCATGGCATTGGCTGCTCTCACTTTTCCTTTCTTTATGTCTTCTTTGGGACAAGGTGTGGCCTTGAAGACCAAGTTGTTATCTTATGCAACGTTGTTATTTGGATTTTACATGGCTTGGAACATTGGTGCCAATGATGTTGCAAATGCTATGGGAACTTCAGTGGGATCTGGTGCCTTGACACTGAGGCAAGCTGTGTTGACAGCAGCAGTGTTGGAGTTTTCAGGGGCATTGTTGATGGGAACTCATGTGACCAGCACAATGCAGAAGGGAATTCTTGTAGGTACTGTGTTTAATGGGAAGGATTCTCTTCTATTTGCTGGGTTGCTTTCTTCACTTGCTGCTGCCGGTACTTGGTTACAGTGTGCTTCATATTATGGTTGGCCAGTATCTACTACCCATTGTATAGTGGGAGCCATGGTCGGGTTTGGTCTAGTATATGGAGGTCCTGGAGCTGTTTTCTGGGGTTCACTGGCAAGGGTGATTTCTTCCTGGGTTATCTCACCACTAATGGGAGCAGCTGTGTCATTTCTTGTGTACAAATGCATCCGAAGGTTTGTGTACAGTGCGCCTAATCCAGGACAAGCAGCTGCTGCTGCAGCACCAATTGCTGTATTTTTGGGTGTAACTGGAATTTCTTTTGCTGCCTTCCCTCTTAGCAAGACCTTTCCTTTAGCTCTGGCCCAGGCTTTAGCCTGTGGAGCTGTTGGTGCTTTTCTTGTTGACAGAATTATCAGAAAACAGCTTGGACATCTTCTTGTCAAGTCAGATACTCCACAACCTGTGCCAAAAGAAGATTCTGTCCACCATAATATAGGATTCCTCTCTGATATTGCTGGTCCAAAGGGTACCCAACTGGAAATAGTTTATGGAGTCTTCGGGTATATGCAGGTCCTCTCAGCATGTTTCATGTCATTTGCTCATGGTGGAAATGATGTCTCCAACGCCATAGGTCCATTGGCGGGTGCACTAGCTATTCTTCAAGGTGCTGTCACAGGAACTGAGATTGTTATTCCAAATGAGGTTCTTGCTTGGGGAGGATTTGGAATCGTCGCAGGGCTAATGATGTGGGGCTATCGAGTGATAGCTACAATTGGAAAGAAAATAACAGAACTTACACCAACCAGAGGATTTGCAGCTGAGTTTGCTGCTGCCTCTGTGGTTCTGTCTGCTTCAAAGCTGGGGCTGCCCATCTCAGCAACCCACACTCTAGTAGGTGCAGTAATGGGTGTGGGATTTGCAAGGGGACTTAACAGTGTTAGGTCAGAAACTGTGAGGGAGATTGTAGCTTCATGGGCAGTCACTATTCCAGTTGGTGCTATGCTATCAGTATTCTACACATGGATCTTGACTAAGCTTTTGTCTTATATTTTATGA 1764 0.4501 MNPSCRFSLTKHTTSPLFLRNSHICLSNITSPFFLRDCLHVKPIIPLSPNITKASSSLGILRFRNCKLSHPFATLSSFAEAEGEEGQKEEIQLNGHHQHTTPKAGENDDLSGMAKAFNISSRTASAISICMALAALTFPFFMSSLGQGVALKTKLLSYATLLFGFYMAWNIGANDVANAMGTSVGSGALTLRQAVLTAAVLEFSGALLMGTHVTSTMQKGILVGTVFNGKDSLLFAGLLSSLAAAGTWLQCASYYGWPVSTTHCIVGAMVGFGLVYGGPGAVFWGSLARVISSWVISPLMGAAVSFLVYKCIRRFVYSAPNPGQAAAAAAPIAVFLGVTGISFAAFPLSKTFPLALAQALACGAVGAFLVDRIIRKQLGHLLVKSDTPQPVPKEDSVHHNIGFLSDIAGPKGTQLEIVYGVFGYMQVLSACFMSFAHGGNDVSNAIGPLAGALAILQGAVTGTEIVIPNEVLAWGGFGIVAGLMMWGYRVIATIGKKITELTPTRGFAAEFAAASVVLSASKLGLPISATHTLVGAVMGVGFARGLNSVRSETVREIVASWAVTIPVGAMLSVFYTWILTKLLSYIL. 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03454 587 PANTHER PHOSPHATE TRANSPORTER 158 584 IPR001204 GO:0005315|GO:0006817|GO:0016020
Seca12g03454 587 MobiDBLite consensus disorder prediction 86 104 - -
Seca12g03454 587 Pfam Phosphate transporter family 171 572 IPR001204 GO:0005315|GO:0006817|GO:0016020
Seca12g03454 587 MobiDBLite consensus disorder prediction 86 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03454 Seca-Chr12 76373335 76377078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03454 6 587 Inorganic Solute Cotransporters AT3G26570 71.761 0.0 787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03454 K14640 - gmx:100787349 887.871