Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03371 ATGGTTCTCACTGAGATCAGGGGAATCCACTATCTACCACCTGAAAACCAAATCCTAGTTCCACCCAACTTTAACTTGCTGCAGAGTGACATCAACATCCCAACAAACCTCCACCATCTCTTAAACCAGTTACCAAACTGCTACTTCCACTCTTCAAGCCACCAATTTGTTCCTCCTCCATCTCCATGCTTCACCACCACCACCACAAGTACTACTAACTCAACCTCTGATGAAGCTGATGAATATCAGCAGAACATAATTGATGAAAGGAAACAAAGGAGAATGATATCTAACAGAGAATCTGCACGCAGATCAAGGATGAGGAAACAGAAACACTTAGATGAACTCTGGTCACAGGTTCTTAGACTCAGGACTGAGAATCACAACCTTATTGATAAACTGAACCATGTGTCTGAGTCACATGATAAGGTTCTTCAAGAAAATGCACGCCTCAAAGAAGAAGCTTCTGATCTTCGCCAAATGCTAGCTGATCTTCAAGTTGGAACTTCTTTTACTAACAACATAACAGATTTTGATGAGGATTTTTGCAACACATCATCACAACTTAGATCTGAGTCCTCATATGAATCACTCACTTCTATGGACATGCTATTAAAATGA 621 0.4058 MVLTEIRGIHYLPPENQILVPPNFNLLQSDINIPTNLHHLLNQLPNCYFHSSSHQFVPPPSPCFTTTTTSTTNSTSDEADEYQQNIIDERKQRRMISNRESARRSRMRKQKHLDELWSQVLRLRTENHNLIDKLNHVSESHDKVLQENARLKEEASDLRQMLADLQVGTSFTNNITDFDEDFCNTSSQLRSESSYESLTSMDMLLK. 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03371 206 Coils Coil 134 168 - -
Seca12g03371 206 FunFam BZIP transcription factor 88 139 - -
Seca12g03371 206 SUPERFAMILY Leucine zipper domain 90 140 IPR046347 GO:0003700|GO:0006355
Seca12g03371 206 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 93 108 IPR004827 GO:0003700|GO:0006355
Seca12g03371 206 SMART brlzneu 86 150 IPR004827 GO:0003700|GO:0006355
Seca12g03371 206 CDD bZIP_plant_GBF1 91 142 IPR045314 GO:0003700|GO:0006355
Seca12g03371 206 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 8 172 IPR044521 -
Seca12g03371 206 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 88 151 IPR004827 GO:0003700|GO:0006355
Seca12g03371 206 Gene3D - 88 143 - -
Seca12g03371 206 Pfam bZIP transcription factor 90 148 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03371 Seca-Chr12 72096628 72097248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03371 66 172 bZIP Transcription Factor Family AT3G30530 68.807 1.46e-47 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca12g03371 bZIP_1 2.6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03371 - - gmx:100778078 268.085