Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03345 ATGCGCAGACGTGCTGCCAGTGAAGATTCCTTGTCTTCCACCTCTAATGGCAATGGTCATACGTCTTCCTTTGGCAATGAAGTTAAGCATGTTGCTTCTGAGACATTTCTCTTGACTCGCCTCGGGTTAAAGATGTTAAGATACCTCGGGGTTGGCTATAAATGGATTACAAAATTTCTTGCCCTTGGTTGTTATGCAATACTGCTTTTTCCAGGCTTTATTCAAGTTGGATATTACTATTTCTTCTCCCGTCAGATACGCAGAAGCGTAGTTTATGGAGATAAACCGCGAAATAGGCTTGACTTGTATTTGCCTAAAAATAACGATGGTCCAAAACCAGTTGTTGCTTTTGTTACTGGTGGAGCCTGGATTATCGGTTACAAAGCATGGGGTTCTCTCTTAGGTCAACAGTTATCGGAGAGAGATATCATTGTGGCATGCATAGATTACAGAAATTTTCCTCAGGGAACCATGAGTGATATGGTAACTGATGCTTCCCAAGGTATCTCATTTGTGTGCAACAATATTGCAGAATTTGGAGGTGACCCTAACAGAATTTACCTAATGGGGCAGTCAGCTGGGGCACATATTGCTGCATGTGCAATAGTGGAGCAGGCAATCAAAGAGGCTGGTGAAGGAGAGAGTACATCTTGGAGTCTTTCCCAGATTAAGGCTTATTTTGGTTTATCTGGAGGGTATAATCTATTTAACCTAATAGATCACTTCCACAGCAGAGGTCTTTATCGTTCAATCTTTTTAAGCATAATGGAAGGGGAGGAATCCCTGCGACGGTTTTCTCCAGAAGTAATGGTTCAAGATCCAAACATTGGAAATGCTGTTTCTCTACTACCTCCTATAGTTCTTTTTCATGGCACTGGAGATTATTCCATACCATCAGATGCCAGGTTTGAGCCTCTTTTAAAAGGGTTTTTGAATTATGTAGTAACAATAGAAAAAGGAATTTATATAAAATGGCCCATGAATGTGTTATGGTTTTTAGTTTTGCCAAGATATACTCAAAGGGCCCTAGTTTTGGGAGTGATTTGTTTTAAGCAATATTTATGTGAAAAGCTTTAA 1077 0.4011 MRRRAASEDSLSSTSNGNGHTSSFGNEVKHVASETFLLTRLGLKMLRYLGVGYKWITKFLALGCYAILLFPGFIQVGYYYFFSRQIRRSVVYGDKPRNRLDLYLPKNNDGPKPVVAFVTGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTMSDMVTDASQGISFVCNNIAEFGGDPNRIYLMGQSAGAHIAACAIVEQAIKEAGEGESTSWSLSQIKAYFGLSGGYNLFNLIDHFHSRGLYRSIFLSIMEGEESLRRFSPEVMVQDPNIGNAVSLLPPIVLFHGTGDYSIPSDARFEPLLKGFLNYVVTIEKGIYIKWPMNVLWFLVLPRYTQRALVLGVICFKQYLCEKL. 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03345 358 SUPERFAMILY alpha/beta-Hydrolases 79 301 IPR029058 -
Seca12g03345 358 Gene3D alpha/beta hydrolase 82 303 IPR029058 -
Seca12g03345 358 MobiDBLite consensus disorder prediction 1 22 - -
Seca12g03345 358 Pfam BD-FAE 100 299 - -
Seca12g03345 358 ProSitePatterns Carboxylesterases type-B serine active site. 179 194 IPR019826 -
Seca12g03345 358 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 16 301 - -
Seca12g03345 358 MobiDBLite consensus disorder prediction 8 22 - -
Seca12g03345 358 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 82 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03345 Seca-Chr12 70930094 70935139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03345 2 301 Carbohydrate Esterase AT1G26120 76.206 3.77e-170 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03345 K15889 - gmx:100790850 538.11