Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03320 ATGTTTGCTGGGACACCAACTGCTATTGTGAACCAAAAGACACAAGGCTCTGAGACTCTAATTGGATGTGCTGCCTCTACTGGTCTTGCTGTTATGATTGTCATCCTCTCCACTAGCCACATCTCCGGTGCTCATCTCAACCCTGTTGTTTGA 153 0.4706 MFAGTPTAIVNQKTQGSETLIGCAASTGLAVMIVILSTSHISGAHLNPVV. 51
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03320 50 PANTHER AQUAPORIN NIP2-1 1 50 IPR034294 -
Seca12g03320 50 SUPERFAMILY Aquaporin-like 1 50 IPR023271 -
Seca12g03320 50 Gene3D Glycerol uptake facilitator protein. 1 50 IPR023271 -
Seca12g03320 50 Pfam Major intrinsic protein 9 50 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03320 Seca-Chr12 69661544 69661696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03320 1 50 Major Intrinsic Protein MIP AT1G80760 86.000 3.84e-23 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03320 K09874 - qsu:112009900 90.8929