Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03302 ATGGAGGTGAAACCAAATTCTCAACCAGTTGTTGTTTCTATACCAATATGTCACTATGACGATACTGAATCAGCCAAAGCATCAAGACAACAGCTTAAAGATGCAATCTATGCTGCCCTGTTTGACATGAATGTTCCTGCTGTTTGTGCTCTCAACCAGGCGACTTTAGCTCTCTATGCTGCAAAACAAACTTCTGGAATAGCTGTTAATATAGGTTTTCAAGTCACATCTGTAGTTCCAATTTTAAATGGTAAAGTGATGCGAAAGGTGGGTGTGGAGGTTGTGGGCTTGGGAGCACTAAAACTTACAGGATTTCTTCGAGAGCAAATGCAACAAAACAACATAAGTTTTGAATCTTTGTACACTGTTCGCACGCTGAAAGAGAGGCTATGCTATGTTGCTGTTGACTATGAAGCTGAGCTATTGAAAGATACACAAGCATCATTTGAAGCTATAGAAGGGTTGTTTACACTCTCAAAAGAGCGGTTTCAAACAGGAGAGATCTTATTCCAGCCACGTCTTGCTGGGGTGCGAGCAATGGGTTTGCACCATGCCATAGCTCTTTGTATGGACCATTGCTATTCTGCGGAATTAGCAGGTGACAAGGATTGGTTTAAGACTGTAGTCTTATCGGGGGGGACTGCATGTTTACCAGGCTTAGCAGAAAGGTTAGAAAAGGAACTTCATTTGTTACTTCCTCCTGATATGTCCAATGGAATCAAAGTAATACCTCCTCCATATGGTGCGGATACTGCATGGTTTGGTGCAAAGATTATTGGCAGTTTGAGCACCTTTCCTGGCCCTTGGTGTACCACAAAGAAGCAATTTCGTCAGAAGTCTAAACTAAACAGAATATGGTGA 861 0.4204 MEVKPNSQPVVVSIPICHYDDTESAKASRQQLKDAIYAALFDMNVPAVCALNQATLALYAAKQTSGIAVNIGFQVTSVVPILNGKVMRKVGVEVVGLGALKLTGFLREQMQQNNISFESLYTVRTLKERLCYVAVDYEAELLKDTQASFEAIEGLFTLSKERFQTGEILFQPRLAGVRAMGLHHAIALCMDHCYSAELAGDKDWFKTVVLSGGTACLPGLAERLEKELHLLLPPDMSNGIKVIPPPYGADTAWFGAKIIGSLSTFPGPWCTTKKQFRQKSKLNRIW. 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03302 286 Pfam Actin 22 272 IPR004000 -
Seca12g03302 286 SUPERFAMILY Actin-like ATPase domain 64 273 IPR043129 -
Seca12g03302 286 SMART actin_3 7 276 IPR004000 -
Seca12g03302 286 PANTHER ACTIN 2 278 IPR004000 -
Seca12g03302 286 Gene3D - 3 277 - -
Seca12g03302 286 Gene3D Actin; Chain A, domain 4 97 179 - -
Seca12g03302 286 Gene3D - 54 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03302 Seca-Chr12 68826382 68838888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03302 1 269 Cytoskeleton Gene Families AT3G12110 32.975 2.72e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03302 K16616 - gmx:100804254 538.11