Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03282 ATGACCCAACAACTAACTGAGAAGAGTGATGTGTACAGTTTTGGGGTAGTTATGCTTGAACTGATAACAGCAAGACAACCAATTGAAAAGGGTAAATACATTGTTCGTGAGGTGCGCACCTTGATGAATAACAAGGATGAAGAGTATTATGGTTTGAGGGAACTCATGGATCCAGTGGTGAGAAACACACCCAACCTCATAGGATTTGGAAGGTTCTTAGAGTTGACAATGCAATGCGTTGAGGAATCAGCTGCAGATCGTCCAACAATGAGTGAAGTTGTGAAAGCACTTGAAACCATGTTACAGAATGATGGAATGAATACAAATTCTACTTCTGCATCCTCATCTGCCACTGACTTTGGAGTTTCCAAGGGTGCTACTATGAGACATCCTTATATTGATACTACTTTTACTAAGAAGGACAATGTTAATGACAGTAATGCCTTTGACTACAGTGGGGGTTACACACTTTCAACTAAAGTAGAGCCTAAATAG 495 0.402 MTQQLTEKSDVYSFGVVMLELITARQPIEKGKYIVREVRTLMNNKDEEYYGLRELMDPVVRNTPNLIGFGRFLELTMQCVEESAADRPTMSEVVKALETMLQNDGMNTNSTSASSSATDFGVSKGATMRHPYIDTTFTKKDNVNDSNAFDYSGGYTLSTKVEPK. 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03282 164 ProSiteProfiles Protein kinase domain profile. 1 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g03282 164 Pfam Protein tyrosine and serine/threonine kinase 3 97 IPR001245 GO:0004672|GO:0006468
Seca12g03282 164 SUPERFAMILY Protein kinase-like (PK-like) 2 112 IPR011009 -
Seca12g03282 164 PANTHER OS01G0253100 PROTEIN 1 105 - -
Seca12g03282 164 Gene3D Transferase(Phosphotransferase) domain 1 1 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03282 Seca-Chr12 68126737 68127231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03282 2 164 Receptor kinase-like Gene Family AT1G79620 55.030 6.43e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Seca12g03282 PK_Tyr_Ser-Thr 1.1e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03282 - - gmx:100792249 287.73