Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g03259 ATGTTTACATGCATAGCGTGTACGAAGCAAACTGATGACAGGGACGATGAAGGAGGACCCCGTGAGAGTGGCACGCCGAGTACAAAAGAAGCCGTCAAAAGCCTGACCACGCAGATAAAGGATATGGCCCTGAAGTTTTCAGGTGCTTACAAGCAATGCAAACCCTGCACAGGGTCTAGTAGCTTCAAGAAAGGAAATAGACCATATCCAGACTTTGATACGATCTCAGAAGGGGTTCCATACCCTTATATTGGAGGTGCAAGCTCAAGTTCAACCCCTGCATGGGACTTCACATCCTCTAATTACCCTGGTGGTAGATCTGACCCAAGATTTACTGGGGCATTTGGTGGTGACCGCACCCCTAGAGGACGTGACTCAGCATCAGTCTGTGATGTAGTGTTAGAGGATGAGGATGAGCCTAAGGAGTGGATGGCACAGGTGGAGCCAGGAGTTCACATTACCTTTGTGTCTCTTCCTAATGGGGGAAATGATCTCAAAAGAATTCGCTTCAGGTATGGTAACAACTTGTACTTGACCTCTGGTTTCAGTTACAAATTTAGTGCTAAAAATTTCCTAATGGTGGTAGATATTTATGATGGCCACTAA 606 0.462 MFTCIACTKQTDDRDDEGGPRESGTPSTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGSSSFKKGNRPYPDFDTISEGVPYPYIGGASSSSTPAWDFTSSNYPGGRSDPRFTGAFGGDRTPRGRDSASVCDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFRYGNNLYLTSGFSYKFSAKNFLMVVDIYDGH. 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g03259 201 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 171 IPR044532 -
Seca12g03259 201 MobiDBLite consensus disorder prediction 9 23 - -
Seca12g03259 201 Pfam Transcription factor regulating root and shoot growth via Pin3 141 171 IPR013591 -
Seca12g03259 201 Pfam Transcription factor BRX N-terminal domain 23 56 IPR027988 -
Seca12g03259 201 ProSiteProfiles BRX domain profile. 141 199 IPR013591 -
Seca12g03259 201 MobiDBLite consensus disorder prediction 8 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g03259 Seca-Chr12 67007109 67010684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g03259 1 199 Major Intrinsic Protein MIP AT1G31880 60.396 2.02e-75 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g03259 - - gmx:100785003 337.421